Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04605 ATGGGTGTAGAGAACAAAGGAACGAGATTGAAACCTACGTTTATATTATTCCTTGTCATTCTTCACCTTTTCCTTTCCACCCTCACCAAATGTTCTTTCACACCCCATGTTAACTATCTCCTTGATTGTGGCTCCTCCCACCCCACTCAGCTCACAGATGGAAGAACCTTCAAATCTGATCGTGAAACCATTTCTCTCCTAGCCACAGATGAAGATGTGCAAATATCACTTCACTCAAATATCTCCCCTTTCGTTCCTTCTTCATTTCTTCCTTTGTATCAAACTGCAAGGGTTTTCCAAGAGGAACCCACCTACTCCTTTTACATATCAAAAACTGGTAGACTTTGGGTTCGTCTTTACTTCTTCCCTCTCTCTAACCCTTCGTATAACCTAACAAGTGCTGTTTTCTCTGTCCAAACTACTCACCATGTGCTCCTGCATGAGTTCTCTGCCAGGAACAATGACTCACCTGTTTTCAAGGAATACCTTGTTAATATTTCTGATAATAGTTTTTCCCTCAAATTCAAGCCCAAGAAAAACTCCTTTGCGTTCATCAATGCAATTGAGGTTGTCTCAGCCCCTGACACTCTTATCTCGGATTCAGCAACTGCACTTTCCCCACTTGATAAATTCAAAGGCTTGTTCAATTCTGCTCTTGAAGTATCCTACAGAATAAATGTTGGTGGTCCCACCATAACTCCTGACGACGACACTTTGGCAAGAACATGGGAAACAGATGGTTCATACAACATCTTCCCACAGGGTTCTGAGACTATTTCTGTCTCCAAACAAGGCATAAAGTATCCTCATACTAGGGTTACACCTTTGATTGCTCCCAACTTGGTTTATGCAAGTGCTGTACACGTGAAGAACGCTACAGCCACACGACCGAATTTCAATCTCAGTTGGATGGTGAGTGTGGATAGGAGCAACTCTTATTTGATAAGAATGCATTTATGTGACATTATTTTGAGCAAGAGTCTTAATCATTTATACTTGAATGTGTACATCAACGGGATTGAGGGTGTGTCAGTTTTGAATCTATCATCGCAAACCAAAGCTCTAGCCACTGCTTTTTACCAGGACTTTGTGTTAAATAAACGAGATATCACAAACGGTTCCATTTTGGTTCAGGTGGGACCGACCCATCTTCCACAAGGCACGACCGATGCAATTCTGAATGGATTTGAGGTGATGAAGATTAGCAACATCGCAGACAGCTTGGATGGTTTATACTCTGTTGATGGGAAATACAAAGGGCCATGTTCAACATCCATGGAAATAAAAATTTTGGCTTATGTTGGACTTGCATTGGCTGTGACAACAATAATGTTGCTAGTAATAACTTGCATAAGGTGGAAAAAGAGGCCGCAAGGTGTACTCCTTCCTATCCATTCCCCTATATCGTGTTCAAGAAAAAGCAGTTGTGGAGGGTCAACAACATCCAGTTCCCGCAAGAGCAATAAACATGGTCATCGTGTCACCCCACAAGGGCCTAAAAGGTTCTTCCCCTTCGGTGAAATGCAACAAGCCACTAATAATTTCGACGAGAATAAAGTAATTGGTGTTGGAGGCTTCGGGAAAGTGTATCTTGGAACGTTGAAAGATGGGACAAAGGTGGCCATAAGACGAGGAAGTGGTAATTCAGAACAAGGCATCAATGAATTCAGAACAGAATTGGAAATGTTGTCAAAGCTACGCCATCGCCACCTTGTTTCATTGATAGGTTTCTGTGATGAAAACTCAGAGATGGTTCTTGTATATGAGTACATGGCTAATGGCCCTTTTCGTTCTCACATCTATGGCTTCGACCTCCCTTATTTGTCATGGCAAAAGAGGCTTGAAATATGCATTGGTGCAGCTCGTGGGTTGTACTACCTCCACACCGGCGCAGCTCAAAGCATCACACACCGTGATGTGAAGACAACAAACATACTCTTAGATGAGAATTACATTGCCAAGGTTTCTGACTTTGGTTTGTCAAAAGTTGTCCCAGATGAAGCTCAAGTTAGCACAGCCGTGAAGGGTAGTTTTGGGTACCTTGATCCCGAGTACTATAGGAGTCAACAACTAACTCAGAAATCTGATATATACTCTTTTGGGGTAGTCGTATTTGAGGTATTATGTGCTAGGCCAGTTATTTGCCTAACACATCCAGCAGAAGAGATTAACTTGGCTGAATGGGCAAAGAAACAACATAGAAGAGGAGTGGTCAATGAAATAATTGATCCACGTATTGTTGTTACTATCAATCCTCAATCGCTTAGTGTTTTTGTGGAAATTGCTGAGAGATGTTTAGCAGATCGTGGTGTTGATAGGCCTAGCATGGGGGATGTGTTGTGGCATTTGGAATACGCGTTGCGCCTACAAGAAGCTGCCTCACGAATTGATCAAGTTGAAGATAAAGACGCAAGTATAGACACAAACGAGGATAATTCTGTTTCGTTTTCTGAGATAGACAACTTAGAGGAGAGGTAG 2478 0.4217 MGVENKGTRLKPTFILFLVILHLFLSTLTKCSFTPHVNYLLDCGSSHPTQLTDGRTFKSDRETISLLATDEDVQISLHSNISPFVPSSFLPLYQTARVFQEEPTYSFYISKTGRLWVRLYFFPLSNPSYNLTSAVFSVQTTHHVLLHEFSARNNDSPVFKEYLVNISDNSFSLKFKPKKNSFAFINAIEVVSAPDTLISDSATALSPLDKFKGLFNSALEVSYRINVGGPTITPDDDTLARTWETDGSYNIFPQGSETISVSKQGIKYPHTRVTPLIAPNLVYASAVHVKNATATRPNFNLSWMVSVDRSNSYLIRMHLCDIILSKSLNHLYLNVYINGIEGVSVLNLSSQTKALATAFYQDFVLNKRDITNGSILVQVGPTHLPQGTTDAILNGFEVMKISNIADSLDGLYSVDGKYKGPCSTSMEIKILAYVGLALAVTTIMLLVITCIRWKKRPQGVLLPIHSPISCSRKSSCGGSTTSSSRKSNKHGHRVTPQGPKRFFPFGEMQQATNNFDENKVIGVGGFGKVYLGTLKDGTKVAIRRGSGNSEQGINEFRTELEMLSKLRHRHLVSLIGFCDENSEMVLVYEYMANGPFRSHIYGFDLPYLSWQKRLEICIGAARGLYYLHTGAAQSITHRDVKTTNILLDENYIAKVSDFGLSKVVPDEAQVSTAVKGSFGYLDPEYYRSQQLTQKSDIYSFGVVVFEVLCARPVICLTHPAEEINLAEWAKKQHRRGVVNEIIDPRIVVTINPQSLSVFVEIAERCLADRGVDRPSMGDVLWHLEYALRLQEAASRIDQVEDKDASIDTNEDNSVSFSEIDNLEER 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04605 825 ProSiteProfiles Protein kinase domain profile. 515 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04605 825 SMART serkin_6 515 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04605 825 FunFam Putative receptor-like protein kinase 38 194 - -
Viun3g04605 825 CDD STKc_IRAK 521 784 - -
Viun3g04605 825 SUPERFAMILY Protein kinase-like (PK-like) 491 785 IPR011009 -
Viun3g04605 825 FunFam receptor-like protein kinase FERONIA 478 590 - -
Viun3g04605 825 MobiDBLite consensus disorder prediction 800 825 - -
Viun3g04605 825 Gene3D Phosphorylase Kinase; domain 1 475 590 - -
Viun3g04605 825 MobiDBLite consensus disorder prediction 471 497 - -
Viun3g04605 825 Pfam Malectin-like domain 41 401 IPR024788 -
Viun3g04605 825 PANTHER OS07G0166700 PROTEIN 501 790 IPR045272 GO:0004714|GO:0006468
Viun3g04605 825 Gene3D - 34 194 - -
Viun3g04605 825 Gene3D - 218 402 - -
Viun3g04605 825 FunFam Receptor-like protein kinase FERONIA 591 805 - -
Viun3g04605 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Viun3g04605 825 Pfam Protein tyrosine and serine/threonine kinase 518 779 IPR001245 GO:0004672|GO:0006468
Viun3g04605 825 MobiDBLite consensus disorder prediction 471 485 - -
Viun3g04605 825 FunFam Receptor-like protein kinase FERONIA 218 403 - -
Viun3g04605 825 Gene3D Transferase(Phosphotransferase) domain 1 591 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04605 Viun-Chr3 53600972 53603590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04605 29 802 Receptor kinase-like Gene Family AT5G61350 58.323 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun3g04605 Malectin_like 7.9e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04605 - - gmx:100814982 1229.16