Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04568 ATGAACCAAGGGAAAGTTCCCAAGAAAATTCACAAGGCTGAAAGGGAGAAAATGAAACGTGAACATTTGAATGAACTCTTTCTTGATCTTGCCAATGCACTTGATGTGAATGAGAACAATGGAAAGGCTTCTATATTGTGTGAAGCGGCTAGGTTGCTAAAAGACTTACTCTCTCAGATCGAGTCCCTCAAGAAAGAGAATGTCACACTGTTGTCTGAATCGCATTATGTGACCATGGAGAAAAATGAGCTGAAGGAGGAGAATTGTAGCCTAGAAACTCAAATTGAGAAACTTCAAGGAGAGATACAGGCAAGAGTTGCTCAATCTAAACCTGACCTGAATGTACCTCCTAATTTGGAACTTGAGCCACTGGAGCAGTCAAATTTTCCAGGACAGAGTCTCCAATTGCATACTATGGAACCTAACTTGCAGCAAGGATCTGCAGTTTTGCTTGTCCCTTTTCGTCCCGATCTTCAAGCTTCGTTTCCAGCTCCTAATGTTAACGAAGTAGCTCCAAATTCTAGTTCTGTTATCAGTAAACCGCATGCAAGGTATCCCACAGCTGCAGATTCATGGCCATCACAGCTGCTTGGATAG 597 0.4255 MNQGKVPKKIHKAEREKMKREHLNELFLDLANALDVNENNGKASILCEAARLLKDLLSQIESLKKENVTLLSESHYVTMEKNELKEENCSLETQIEKLQGEIQARVAQSKPDLNVPPNLELEPLEQSNFPGQSLQLHTMEPNLQQGSAVLLVPFRPDLQASFPAPNVNEVAPNSSSVISKPHARYPTAADSWPSQLLG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04568 198 Coils Coil 81 101 - -
Viun3g04568 198 MobiDBLite consensus disorder prediction 171 198 - -
Viun3g04568 198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 8 83 IPR036638 GO:0046983
Viun3g04568 198 Coils Coil 53 73 - -
Viun3g04568 198 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 56 IPR011598 GO:0046983
Viun3g04568 198 PANTHER TRANSCRIPTION FACTOR BHLH47 2 197 - -
Viun3g04568 198 Gene3D - 7 82 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04568 Viun-Chr3 53310618 53313057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04568 3 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 52.133 5.82e-61 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04568 - - gmx:100809240 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04568 3 53310618 53313057 Viun3g04568 3 53310618 53313057 ECH