Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04567 ATGGGATCAGAAGGTGTGGCTCCTGCTGTTGTTGAGACATCAAAAAGCAGGTCTTCTTCTGGTAAAATGAACCAAGGGAAAGTTCCCAAGAAAATTCACAAGGCTGAAAGGGAGAAAATGAAACGTGAACATTTGAATGAACTCTTTCTTGATCTTGCCAATGCACTTGATGTGAATGAGAACAATGGAAAGGCTTCTATATTGTGTGAAGCGGCTAGGTTGCTAAAAGACTTACTCTCTCAGATCGAGTCCCTCAAGAAAGAGAATGTCACACTGTTGTCTGAATCGCATTATGTGACCATGGAGAAAAATGAGCTGAAGGAGGAGAATTGTAGCCTAGAAACTCAAATTGAGAAACTTCAAGGAGAGATACAGGCAAGAGTTGCTCAATCTAAACCTGACCTGAATGTACCTCCTAATTTGGAACTTGAGCCACTGGAGCAGTCAAATTTTCCAGGACAGAGTCTCCAATTGCATACTATGGAACCTAACTTGCAGCAAGGATCTGCAGTTTTGCTTGTCCCTTTTCGTCCCGATCTTCAAGCTTCGTTTCCAGCTCCTAATGTTAACGAAGTAGCTCCAAATTCTAGTTCTGTTATCAGTAAACCGCATGCAAGGTATCCCACAGCTGCAGATTCATGGCCATCACAGCTGCTTGGATAG 663 0.4284 MGSEGVAPAVVETSKSRSSSGKMNQGKVPKKIHKAEREKMKREHLNELFLDLANALDVNENNGKASILCEAARLLKDLLSQIESLKKENVTLLSESHYVTMEKNELKEENCSLETQIEKLQGEIQARVAQSKPDLNVPPNLELEPLEQSNFPGQSLQLHTMEPNLQQGSAVLLVPFRPDLQASFPAPNVNEVAPNSSSVISKPHARYPTAADSWPSQLLG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04567 220 Coils Coil 75 95 - -
Viun3g04567 220 Coils Coil 103 123 - -
Viun3g04567 220 Gene3D - 22 95 IPR036638 GO:0046983
Viun3g04567 220 MobiDBLite consensus disorder prediction 193 220 - -
Viun3g04567 220 MobiDBLite consensus disorder prediction 1 33 - -
Viun3g04567 220 PANTHER TRANSCRIPTION FACTOR BHLH47 10 219 - -
Viun3g04567 220 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 29 78 IPR011598 GO:0046983
Viun3g04567 220 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 30 105 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04567 Viun-Chr3 53310618 53313127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04567 22 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 51.402 6.76e-61 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04567 - - gmx:100782436 367.851