Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04551 ATGTTGAAGCTTTTGGTTAGTAGAGGAACTAGGGTTTCGACTTCACGCATCCACAACGGCTTTGCGGCATTCAGTTTCCCTAGATGTGTTCATTCATTGCAATTTGCAACTGTAGAAGCAGAAGAGATATCAGGTTCCAAGCCTGCTGAAGTTTTGAACCTGGTGCAAGGTAAATGGGTTGGAGCTTCAAAGTGGAATACAATTGTAGATCCCCTAAATGGAGACTCATTTATTAAAATTGCTGAAGTTGACGAAACAGGCATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAGCATGGTGTACACAATCCTTTTAAGGCACCAGAGCGATATCTCATGTATGGAGATATATCTACCAAGGCAGCTCACATGCTATCACTTCCTAAGGTTTCAGATTTTTTTACAAGGTTAATCCAAAGAGTTTCTCCAAAGAGCTACCAGCAGGCTTTTGGGGAAGTGTACGTGACACAAAAGTTTCTAGAGAACTTTTGCGGGGATCAGGTTCGTTTCCTAGCGAGGTCTTTTGCCGTACCTGGAAATCATCTTGGGCAGCAAAGTCATGGTTTTCGTTGGCCATATGGTCCTGTGGCAATTATTACTCCTTTTAATTTTCCCTTGGAGATTCCTGTTCTTCAATTGATGGGTGCACTTTATATGGGCAACAAACCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTCATGGAACAAATGTTGCGCCTGCTTCATTCCTGTGGCTTACCTGTGGAAGATGTTGACTTCATAAATTCAGATGGGAAGACAATGAACAAGCTGTTGATGGAGGCAAATCCTCGAATGACCCTTTTTACTGGAAGTTCAAGAGTGGCTGAGAAGTTGGCTGTTGATTTGAAGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGTCCTGATGTCCATCAGGAAGATTACATTGCGTGGGTATGTGATCAAGATGCATATGCATGCAGTGGTCAGAAATGCTCGGCTCAGTCATTATTATTTATGCATGAGAACTGGTCTAAAACTTCGTTGCTATCAAAGTTGAAAGATCTTGCAGAAAGAAGAAAGCTGACAGACTTGACAATCGGCCCAGTCCTCACAGTTACTACTGATTCAATGCTTGAACATGTCAATAAATTGCTTGAGATACCAGGATCAAAGCTGCTTTTCGGAGGTCGACCTTTGGAGGATCATTCAATTCCGTCTATTTATGGTGCGATTAAACCAACAGCTGTTTATGTTCCTCTTGAAGAAATTATGAAGGATAAGAATTTTGAGCTTGTGACAAAAGAAATATTTGGACCCTTTCAGGTTATTACTGATTACAAAAATAGTGAACTATCAGTTGTATTGGATGCTTTGGAAAGAATGCATAACCATTTAACAGCTGCTGTAGTTTCAAACGATGTTTTATTTTTGCAGGAAGTTATTGGTAATTCGGTAAACGGTACTACTTATGCTGGTTTAAGAGCAAGGACTACCGGAGCACCACAGAATCACTGGTTTGGACCCGCCGGTGATGCAAGAGGTGCAGGAATTGGTACACCAGAGGCCATAAAACTTGTATGGTCTTGTCACAGAGAAGTTATCTATGATATTGGGCCGGTGCCAAAGAATTGGGAAATTCCTCCATCCACTTGA 1662 0.4188 MLKLLVSRGTRVSTSRIHNGFAAFSFPRCVHSLQFATVEAEEISGSKPAEVLNLVQGKWVGASKWNTIVDPLNGDSFIKIAEVDETGIQPFVESLSSCPKHGVHNPFKAPERYLMYGDISTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHSCGLPVEDVDFINSDGKTMNKLLMEANPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLTDLTIGPVLTVTTDSMLEHVNKLLEIPGSKLLFGGRPLEDHSIPSIYGAIKPTAVYVPLEEIMKDKNFELVTKEIFGPFQVITDYKNSELSVVLDALERMHNHLTAAVVSNDVLFLQEVIGNSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREVIYDIGPVPKNWEIPPST 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04551 553 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 29 553 IPR044638 GO:0004029
Viun3g04551 553 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
Viun3g04551 553 CDD ALDH_F12_P5CDH 53 541 - -
Viun3g04551 553 SUPERFAMILY ALDH-like 53 500 IPR016161 GO:0016491
Viun3g04551 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 303 IPR016162 GO:0016491
Viun3g04551 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 494 IPR016163 GO:0016620
Viun3g04551 553 FunFam Aldehyde dehydrogenase 12 310 498 - -
Viun3g04551 553 FunFam probable aldehyde dehydrogenase 44 302 - -
Viun3g04551 553 Pfam Aldehyde dehydrogenase family 122 495 IPR015590 GO:0016491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04551 1 553 Aldehyde Dehydrogenase Gene Family AT5G62530 78.417 0.0 945
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04551 K00294 - gmx:100806579 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04551 3 53154136 53161972 Viun3g04551 3 53154136 53161972 ECH