Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04513 ATGTCCAACGGATCCCCTCCTCCGGTGACCGGCGAACGGCCCCTGCCACCGGAAGCCAACCCCTCAAACCATGTTTCCGATTCGAAGGAGGAAACCGCAGTGGCTCCTCCCATAACCACCAGGAGTACCCGCCCGTCCCGGGCTTGCACCATGCGCGCTGCCTCTCGCCTCCTTTCCTCGCCGGCGGCGGCGAAGAAGGAGGTTTCTCCGCCGCCGCCGCCGCAATGCAGCAAGATCGTTACTCCGCTGGTGGAGCCGCCGTCGCCGTCACAGTTGCCACGGTGGAACCTGCGGACGATGTGGGAGTTTGCTTCCGTGCTGAATTTCTTGCACCTATTTATGCCACTTTTGAATATCTCGCTGGAATTTTCTGCGGAAGAGTTGGAGACTGCCCTTCTTACCCCCAACGATACTCTGTTTCATATTCATATGCCTTTGCTAAAGGCAATCCCTCCTATTACCCGAATGGCACTCACACGAGATACTTGGATAACCGTATTGTGCAGGAAATTGAGAGATTGGTGGCATTGGGTTGCTGATGGGGATCTTCCAGTTGTTGCTTCCCATGGGGCGGAGATTGAAGTGTATAAATCACTTGATCCAGGGATCCGCGTTGTCATCTTAAAAGCAATATGCGACATTCGTGTTGAGCAAGAAGACATCCGAAGTTATATTGACAACTCAATTAAACACGGTGTTCGACTTTCAACATTCCGTAAAGAGCGTATTGGAGGTGATTCAAACGGAGTTTCTTATTGGTATGAAGATGATCCCATTATTGGTCACAGGCTGTATCGAGAAATAAGGAAAACTGAAGTGATTCAAATGAAGAAAGGGAAAGCAAGAGGTTCCCAGGTTGTTTCTAGCACATCATACCAGTGGGAAGCAGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAACAGAGACTTCTGTGGGGAAAAAGCTGAAGATAGACATGCTTCCTGAAGTTGAGAAAGCTCATAAGAAAAAGGAGAAATTGCTGAAAAAGCAACACCGACAAGCTCTTCTGCTCGATAATTACTTGGTTGTTGATGGGCTTGGTCCAGGGCGTTCTCTTCGTGACAGGAAACCTGTTACCTACACTTTTGATGATTTCGACCGGTCAATCAATGAGGCAATTAAAGTAACCAAGCAGAAACAGCCATCTCCAGAACGTATGCCCAGGAGAGAATCGGTAGCAAAACCTGAAGCTTTGACTAATGGTAAATATGGTCCTCTGCATGCCACACAAGATGCGAATTTTGGTATACCGTCTTCAGAATCAGCTGACTCTTATGATGACAAGGAAGACCATGAAAATGACAACTTGGATCGAAGCAATCGTCAAAGACGGAGACCTAATCGGTATTCAGAAAGGGAGTTTGTTGAAGCAGTATCATACAATGAGGCAGATTTTGATAGTGACGATGATATTGTTGGTGAAGCTGTATATGATGAAGAATATCTAGAGAAACGCAAGCATAAAAGGAAGTCTTCCAGTAGCTCTGAAGGAGAAGAAGAATATGAATGGGACGAATACAATGTTGAAGATGACGAAGAAGAAGAAGAAGATGATGATGATGATTCCTTGAGCATGAGTGAGGATAGTGACAAACCCCGCAAGGTCAAACGGTTGCCAGGCCGTACTAGGAGAGAAACCAAGCTTAGATCTGTGGGTGAGATTCAATCAAGTCTAAGACGAAGTAAAAGGGCAACTAGAAATTCTATAAATTACCGACAATATGAGGCCTCAGAATCAGAAACTGAGTTTATCAAATCTGACAAGTCTGATACATCAGCTGATCATTCAGAACCCAGTGAGAATGGTGAATACATGATGGAAAGTGAAGACTCAGGTGGCAGTGATGATGAAGTACAAGAAATGAAAGTAGATGAGCCTGTTGCATACCCTGCAGTAGAAGAGAATGAACAAAACCAGGCTCCTGAAAAATTAAGTAGCCCTGGTCAGGAGGAAGTTGAGAGCACAGGAAAGAGACGCTTCCTCGATTTGAATGAGCTTGCCCCTACCACTGGTTTTGATGATGGTCCAAACACAATAATGAAAGATGAAGACAATGATTACTGA 2118 0.4537 MSNGSPPPVTGERPLPPEANPSNHVSDSKEETAVAPPITTRSTRPSRACTMRAASRLLSSPAAAKKEVSPPPPPQCSKIVTPLVEPPSPSQLPRWNLRTMWEFASVLNFLHLFMPLLNISLEFSAEELETALLTPNDTLFHIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVADGDLPVVASHGAEIEVYKSLDPGIRVVILKAICDIRVEQEDIRSYIDNSIKHGVRLSTFRKERIGGDSNGVSYWYEDDPIIGHRLYREIRKTEVIQMKKGKARGSQVVSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTETSVGKKLKIDMLPEVEKAHKKKEKLLKKQHRQALLLDNYLVVDGLGPGRSLRDRKPVTYTFDDFDRSINEAIKVTKQKQPSPERMPRRESVAKPEALTNGKYGPLHATQDANFGIPSSESADSYDDKEDHENDNLDRSNRQRRRPNRYSEREFVEAVSYNEADFDSDDDIVGEAVYDEEYLEKRKHKRKSSSSSEGEEEYEWDEYNVEDDEEEEEDDDDDSLSMSEDSDKPRKVKRLPGRTRRETKLRSVGEIQSSLRRSKRATRNSINYRQYEASESETEFIKSDKSDTSADHSEPSENGEYMMESEDSGGSDDEVQEMKVDEPVAYPAVEENEQNQAPEKLSSPGQEEVESTGKRRFLDLNELAPTTGFDDGPNTIMKDEDNDY 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04513 705 MobiDBLite consensus disorder prediction 496 515 - -
Viun3g04513 705 PANTHER REMODELING AND SPACING FACTOR 1 41 668 IPR028938 GO:0006355|GO:0031213
Viun3g04513 705 MobiDBLite consensus disorder prediction 440 468 - -
Viun3g04513 705 MobiDBLite consensus disorder prediction 1 80 - -
Viun3g04513 705 MobiDBLite consensus disorder prediction 516 543 - -
Viun3g04513 705 MobiDBLite consensus disorder prediction 596 620 - -
Viun3g04513 705 MobiDBLite consensus disorder prediction 391 468 - -
Viun3g04513 705 MobiDBLite consensus disorder prediction 496 705 - -
Viun3g04513 705 MobiDBLite consensus disorder prediction 66 80 - -
Viun3g04513 705 MobiDBLite consensus disorder prediction 569 595 - -
Viun3g04513 705 MobiDBLite consensus disorder prediction 633 647 - -
Viun3g04513 705 MobiDBLite consensus disorder prediction 21 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04513 Viun-Chr3 52882285 52889604 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04513 - - gmx:100795519 1141.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04513 3 52882285 52889604 Viun3g04513 3 52882285 52889604 ECH
Viun3g04513 3 52882285 52889604 Viun9g01123 9 9376017 9384699 PCT