Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04466 ATGTCGCTCAAGCGCCGCCCCGATGACGGCAAGACTCCAGACGACAAGCGGAGGAAGCCGCCTCCTTTCTCCAGTGTGGTGCGTGACGTGATGAGATTACAATCACTCGGGCATTTGCTGGAGCCAATTCTTGAACCATTGGTTCGGAAAGTGGTTAAGGAAGAAGTTGAAGCTGCCCTAAAGAGGCATTTAACCAGCATGAAACAGACCTGTGGGAAGGAGTTGCATACTACTGAATTAAGAAATTTGCAGCTGCAGTTTGAAAACAGCATTTCTCTGCCTGTCTTTACTGGAGGTCGGATTGAAGGAGAGGATGGTTCTAACCTAAGAATAAGTTTAGTTGATGGCCTAACTGGGGAGGTTGTCTGTACAGGACCTGAATCCATGGCTAAGGTGGAAATTGTAGTTCTTGAGGGTGATTTTGAAGAAGAAAGTGATATTTGGATGCCCGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTTCTTACAGGAGATGTAATCTTATATCTTAAAGATGGTGTTGGTATGGTGGGTGAAATTTCGTATACGGATAATTCAAGCTGGACAAGGAGCCGCAGGTTCAGGCTTGGGGCAAGAGTTTTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTTATTGTCAGAGATCACAGGGGAGAATTGTATAAGAAGCACCATCCTCCTAGTATGTCGGATGAAGTTTGGAGATTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAGATCCTTACTGTTAGAGAGTTTCTCACGCTTCTCAATCTGGATCCAGCAAAGCTGCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGTACTTGATACAACTAGGCACGTGTACTTCCCTTCTAATTCTCAGCAACATGGTGTGGTCTTCAATGCTGTGGGACAAGTGACTGGACTGCTTTCTGAATGCGAGTTGAGGCTCAAAACACAGTTGCTACTGCATTAA 1056 0.4536 MSLKRRPDDGKTPDDKRRKPPPFSSVVRDVMRLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTSMKQTCGKELHTTELRNLQLQFENSISLPVFTGGRIEGEDGSNLRISLVDGLTGEVVCTGPESMAKVEIVVLEGDFEEESDIWMPEEFKSNIVREREGKKPLLTGDVILYLKDGVGMVGEISYTDNSSWTRSRRFRLGARVLDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSMSDEVWRLEKIGKDGAFHKRLSREKILTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRHVYFPSNSQQHGVVFNAVGQVTGLLSECELRLKTQLLLH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04466 351 PANTHER OS02G0177800 PROTEIN 16 340 IPR012416 GO:0005516
Viun3g04466 351 MobiDBLite consensus disorder prediction 1 23 - -
Viun3g04466 351 Pfam Calmodulin binding protein central domain 241 306 IPR046830 -
Viun3g04466 351 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04466 Viun-Chr3 52349392 52353695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04466 1 341 Calmodulin-binding Proteins AT5G62570 60.057 5.21e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04466 - - gmx:100804548 606.675