Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04465 ATGAGATTACAATCACTCGGGCATTTGCTGGAGCCAATTCTTGAACCATTGGTTCGGAAAGTGGTTAAGGAAGAAGTTGAAGCTGCCCTAAAGAGGCATTTAACCAGCATGAAACAGACCTGTGGGAAGGAGTTGCATACTACTGAATTAAGAAATTTGCAGCTGCAGTTTGAAAACAGCATTTCTCTGCCTGTCTTTACTGGAGGTCGGATTGAAGGAGAGGATGGTTCTAACCTAAGAATAAGTTTAGTTGATGGCCTAACTGGGGAGGTTGTCTGTACAGGACCTGAATCCATGGCTAAGGTGGAAATTGTAGTTCTTGAGGGTGATTTTGAAGAAGAAAGTGATATTTGGATGCCCGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTTCTTACAGGAGATGTAATCTTATATCTTAAAGATGGTGTTGGTATGGTGGGTGAAATTTCGTATACGGATAATTCAAGCTGGACAAGGAGCCGCAGGTTCAGGCTTGGGGCAAGAGTTTTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTTATTGTCAGAGATCACAGGGGAGAATTGTATAAGAAGCACCATCCTCCTAGTATGTCGGATGAAGTTTGGAGATTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAGATCCTTACTGTTAGAGAGTTTCTCACGCTTCTCAATCTGGATCCAGCAAAGCTGCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGTACTTGATACAACTAGGCACGTGTACTTCCCTTCTAATTCTCAGCAACATGGTGTGGTCTTCAATGCTGTGGGACAAGTGACTGGACTGCTTTCTGAATGCGAGTATGTCACAGTAGATAAGCTGTCTGAAACTGAAAAGGTTGAGGCTCAAAACACAGTTGCTACTGCATTAAGACAAGGGGAGAAATATGCAACTTTTGAAGATGAAGATTCTCTCATGGAAGGGTCTTCACACTTAACTAATGTACTTCACTCTCACTCCCCAAGCTCTCCCAAGACTGAGGGATCAAGTGCCAACAAGCTTTTGGGTCCCCAAAAAACTGGAGGATTCAATTACCCCCAAACAAATGCCTCTTCTCCAGATATCATGTCATCCATTTATTCTGTTGGTGGAACTAGTAGCTTGGATGACTATTGCTTGCCTAATTTCGACAACATGGGCCTCAGATATGATCAGACCCTCAGTTTTCCTGTCCAAGTCTCCAACTCTTTGATCTGTGACACTGATTCAATGGCTCATGCTTTTAGTGAAGAAGATCATCTGCAATTTTTTGATACTGATCTTCAATCTCACGTTGAAGCTGACTTACAGAGTGCTGTTGATAGCTTCATGCTCGCACGTTCTACAGCCAATGGTGGTGCGCAGAGGAGATGGAGAAAGGTATGCAACGTCCTAAAATGGTTCATGGTTAGGAAACGAGGAAACCAAATACAGGTAAGGTTGTGA 1557 0.4342 MRLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTSMKQTCGKELHTTELRNLQLQFENSISLPVFTGGRIEGEDGSNLRISLVDGLTGEVVCTGPESMAKVEIVVLEGDFEEESDIWMPEEFKSNIVREREGKKPLLTGDVILYLKDGVGMVGEISYTDNSSWTRSRRFRLGARVLDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSMSDEVWRLEKIGKDGAFHKRLSREKILTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRHVYFPSNSQQHGVVFNAVGQVTGLLSECEYVTVDKLSETEKVEAQNTVATALRQGEKYATFEDEDSLMEGSSHLTNVLHSHSPSSPKTEGSSANKLLGPQKTGGFNYPQTNASSPDIMSSIYSVGGTSSLDDYCLPNFDNMGLRYDQTLSFPVQVSNSLICDTDSMAHAFSEEDHLQFFDTDLQSHVEADLQSAVDSFMLARSTANGGAQRRWRKVCNVLKWFMVRKRGNQIQVRL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04465 518 Pfam Calmodulin binding protein-like N-terminal domain 53 198 IPR046831 -
Viun3g04465 518 MobiDBLite consensus disorder prediction 357 392 - -
Viun3g04465 518 Pfam Calmodulin binding protein C-terminal domain 283 340 IPR046829 -
Viun3g04465 518 PANTHER OS02G0177800 PROTEIN 5 415 IPR012416 GO:0005516
Viun3g04465 518 Pfam Calmodulin binding protein central domain 211 276 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04465 Viun-Chr3 52348803 52353694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04465 1 323 Calmodulin-binding Proteins AT5G62570 62.037 5.97e-148 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04465 - - gmx:100793156 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04465 3 52348803 52353694 Viun3g04465 3 52348803 52353694 ECH