Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04464 ATGTCGCTCAAGCGCCGCCCCGATGACGGCAAGACTCCAGACGACAAGCGGAGGAAGCCGCCTCCTTTCTCCAGTGTGGTGCGTGACGTGATGAGATTACAATCACTCGGGCATTTGCTGGAGCCAATTCTTGAACCATTGGTTCGGAAAGTGGTTAAGGAAGAAGTTGAAGCTGCCCTAAAGAGGCATTTAACCAGCATGAAACAGACCTGTGGGAAGGAGTTGCATACTACTGAATTAAGAAATTTGCAGCTGCAGTTTGAAAACAGCATTTCTCTGCCTGTCTTTACTGGAGGTCGGATTGAAGGAGAGGATGGTTCTAACCTAAGAATAAGTTTAGTTGATGGCCTAACTGGGGAGGTTGTCTGTACAGGACCTGAATCCATGGCTAAGGTGGAAATTGTAGTTCTTGAGGGTGATTTTGAAGAAGAAAGTGATATTTGGATGCCCGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTTCTTACAGGAGATGTAATCTTATATCTTAAAGATGGTGTTGGTATGGTGGGTGAAATTTCGTATACGGATAATTCAAGCTGGACAAGGAGCCGCAGGTTCAGGCTTGGGGCAAGAGTTTTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTTATTGTCAGAGATCACAGGGGAGAATTGTATAAGAAGCACCATCCTCCTAGTATGTCGGATGAAGTTTGGAGATTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAGATCCTTACTGTTAGAGAGTTTCTCACGCTTCTCAATCTGGATCCAGCAAAGCTGCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGTACTTGATACAACTAGGCACGTGTACTTCCCTTCTAATTCTCAGCAACATGGTGTGGTCTTCAATGCTGTGGGACAAGTGACTGGACTGCTTTCTGAATGCGAGTATGTCACAGTAGATAAGCTGTCTGAAACTGAAAAGGTTGAGGCTCAAAACACAGTTGCTACTGCATTAAGACAAGGGGAGAAATATGCAACTTTTGAAGATGAAGATTCTCTCATGGAAGGGTCTTCACACTTAACTAATGTACTTCACTCTCACTCCCCAAGCTCTCCCAAGACTGAGGGATCAAGTGCCAACAAGCTTTTGGGTCCCCAAAAAACTGGAGGATTCAATTACCCCCAAACAAATGCCTCTTCTCCAGATATCATGTCATCCATTTATTCTGTTGGTGGAACTAGTAGCTTGGATGACTATTGCTTGCCTAATTTCGACAACATGGGCCTCAGATATGATCAGACCCTCAGTTTTCCTGTCCAAGTCTCCAACTCTTTGATCTGTGACACTGATTCAATGGCTCATGCTTTTAGTGAAGAAGATCATCTGCAATTTTTTGATACTGATCTTCAATCTCACGTTGAAGCTGACTTACAGAGTGCTGTTGATAGCTTCATGCTCGCACGTTCTACAGCCAATGGTGGTGCGCAGAGGAGATGGAGAAAGGTATGCAACGTCCTAAAATGGTTCATGGTTAGGAAACGAGGAAACCAAATACAGGTAAGGTTGTGA 1647 0.4451 MSLKRRPDDGKTPDDKRRKPPPFSSVVRDVMRLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTSMKQTCGKELHTTELRNLQLQFENSISLPVFTGGRIEGEDGSNLRISLVDGLTGEVVCTGPESMAKVEIVVLEGDFEEESDIWMPEEFKSNIVREREGKKPLLTGDVILYLKDGVGMVGEISYTDNSSWTRSRRFRLGARVLDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSMSDEVWRLEKIGKDGAFHKRLSREKILTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRHVYFPSNSQQHGVVFNAVGQVTGLLSECEYVTVDKLSETEKVEAQNTVATALRQGEKYATFEDEDSLMEGSSHLTNVLHSHSPSSPKTEGSSANKLLGPQKTGGFNYPQTNASSPDIMSSIYSVGGTSSLDDYCLPNFDNMGLRYDQTLSFPVQVSNSLICDTDSMAHAFSEEDHLQFFDTDLQSHVEADLQSAVDSFMLARSTANGGAQRRWRKVCNVLKWFMVRKRGNQIQVRL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04464 548 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
Viun3g04464 548 MobiDBLite consensus disorder prediction 1 23 - -
Viun3g04464 548 MobiDBLite consensus disorder prediction 387 422 - -
Viun3g04464 548 Pfam Calmodulin binding protein central domain 241 306 IPR046830 -
Viun3g04464 548 Pfam Calmodulin binding protein C-terminal domain 313 370 IPR046829 -
Viun3g04464 548 PANTHER OS02G0177800 PROTEIN 16 444 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04464 Viun-Chr3 52348803 52353695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04464 1 353 Calmodulin-binding Proteins AT5G62570 60.000 3.05e-154 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04464 - - gmx:100793156 981.089