Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04451 ATGGGAGTTGGAGGAAGATTACTGGAATGGACTCCATTTGTAGCCATGATAATGGTGGAGTGCCTTGACGTCGGTCTCTCCACTTTAGGTAAAGCCGCCATGAACAGAGGAATGAACCATTTCGTCTTTGTTGTCTACTCCAACGCCCTTGCCACCCTCATTCTCCTCCCTCTCGCTTTCTTCTTCAACAGAACCATGAGATTGCCCCTTTCTTTCGCTCTTCTCTGCAAGTTCTTCCTCCTAGCCACTCTTGGCATAACTGTTATGCAGAATTGTGTTTTCACCGCCATTGACTACAGCTCTCCCACTCTTGGATCCGCCATGAACAATTTGACTCCAGCTATCACTTTTGTGCTAGCTGTCATCTTCGGGATGGAGCAGTTGAATATTGGAAGCTCAATAAGCCAGATCAAGGTCACAGGCACAGTGCTATCCATATCTGGAGCATTACTCGTGACCCTTTACAAGGGCATTCCCATCACCAGCTTCCGAATTCAACACTCTCCATCGAAACCATTGTCATCTTTGTTGGCTCAAACCAGTAACTGGGCAATTGGGGGTGCCTTCTTTGCCACTGCTTCTGTCTCTCTTGCACTCTGGAATATTACACAGGCAGCAATTCTTAAAGGATATTCGTCACAGTCAACCATATTAGCCTTCTATTGCCTGTTTGGAACTATCCAAAGTGCAATACTGTCTCTCATTGTAGTCAAGGATTCAAATGACTGGAAAATAAGCCCCGACATTGAGCTCATCTCTATATTATATTCAGCTATTATAGGAAGTGTGGTGTCTTTTTCAGTAATGACTTGGTGCATAAAAAGGAAAGGACCTATTTTTGTTAGCTTGTTCAAGCCTGTTGGGATTGCCATTGCTGCCTTTTCTAGTGTCATCTTCCTTGGTGAAACGCTTCATATTGGCAGTGTCCTAGGCGCAGTGATAATCGCCATAGGATTTTACACAGTGATGTGGGCACAATCCAAAGAGGAAAACGAAAAACGCCTCCAAGTTGATGCACAATCATTGCCATCTTCTGAAGCGAGTCCTCTACTGGAGACAATCACGTGA 1068 0.4485 MGVGGRLLEWTPFVAMIMVECLDVGLSTLGKAAMNRGMNHFVFVVYSNALATLILLPLAFFFNRTMRLPLSFALLCKFFLLATLGITVMQNCVFTAIDYSSPTLGSAMNNLTPAITFVLAVIFGMEQLNIGSSISQIKVTGTVLSISGALLVTLYKGIPITSFRIQHSPSKPLSSLLAQTSNWAIGGAFFATASVSLALWNITQAAILKGYSSQSTILAFYCLFGTIQSAILSLIVVKDSNDWKISPDIELISILYSAIIGSVVSFSVMTWCIKRKGPIFVSLFKPVGIAIAAFSSVIFLGETLHIGSVLGAVIIAIGFYTVMWAQSKEENEKRLQVDAQSLPSSEASPLLETIT 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04451 355 PANTHER WAT1-RELATED PROTEIN 12 334 IPR030184 GO:0016020|GO:0022857
Viun3g04451 355 Pfam EamA-like transporter family 187 323 IPR000620 GO:0016020
Viun3g04451 355 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020
Viun3g04451 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 328 - -
Viun3g04451 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04451 Viun-Chr3 52291368 52293924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04451 2 355 Nodulin-like Gene Family AT5G40230 42.005 1.18e-84 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04451 - - psat:127073896 480.715