Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04440 ATGATCCATAAGAGCAAGAAGGTGGAGGACAAGACGAAGAAGCATAAAAAATCTTTGACTATGGCTGCTCGTAGACTTTCCTCCTGGTTACTCTCTCGCTCTCTCTCTTCTTATTCCCATTCTTCTGGAGCTGCTTCTTGGCTTCACTCACTAGGAAGAAATTCTGGAGGGTGGAGAAACATTAACAGATTTAGCACCGCTGCAGCAGTTGAGGACCTAATCACTCCACAAGTTCCAATACGTTATACACAGCACCTGATAAATGGGAAATTTGTGGATGCAGCATCAGGGAAAACATTTCCAGCTTATGACCCGCGCACGGGAGAAGTGATTGCTAATGTTGCTGAAGGGGATGTTGAAGACATCAACCGTGCAGTATCAGCAGCTCGCAAGGCCTTTGATGAAGGGCCTTGGCCTAAAATGAGTGCATATGAAAGAAGTCGAATATTGCTTCGTTTTGCTGATTTGGTTGAGAAACACAGCGATGAGCTTGCTGCTCTGGAGACATGGAACAATGGGAAACCTTATGAACAGGCCAAGACAGAACTTCCATTGTTTGTGCGTTTATTTCACTATTATGCTGGTTGGGCGGATAAAATTCACGGGTTGACCGTCCCAGCTGATGGAGATTATCATGTTCAGACATTGCATGAACCAGTTGGTGTAGCAGGACAAATTATACCTTGGAACTTTCCTTTAGTTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAATACCATTGTCCTGAAGACTGCTGAGCAAACACCACTAACAGCTCTCTTTGCTGCAAAACTATTTCATGAGGCTGGTCTTCCGGAAGGTGTTCTGAATATAGTTTCTGGGTATGGTCCAACTGCTGGTGCAGCTCTTGCAAGTCATATGGACGTGGACAAGCTAGCATTTACTGGCTCGACAGATACTGGAAAAATTGTACTTGAATTGGCTGCAAGAAGTAATCTTAAGCCAGTGACATTGGAGCTTGGAGGGAAATCACCTTTCATAGTGTTCGACGATGCTGATGTTGACAAGGCTGTTGAACTTGCACACTTTGCTCTGTTCTTTAATCAGGGGCAATGTTGCTGTGCCGGGTCTCGTACTTTTGTACATGAACGTGTCTATGACGAGTTCTTGGAGAAATCAAAGAAACGGGCTTTGAGACGTGTTGTTGGAGATCCATTCAAGAAAGGTGTTGAACAAGGTCCTCAGATTGATGGAGAACAATTTGAGAAAGTCCTTAGGTACATAAAGTCTGGGATTGAAAGCAATGCTACCCTTGAATGTGGGGGAGATAGATTGGGTTCAAAAGGATTCTTTATCCAGCCAACTGTCTTCTCAAATGTGCAGGATGACATGTTGATAGCACAAGACGAAATCTTTGGCCCAGTTCAGTCCATCTTGAAATTCAAGGACACTGATGAAGTAATTGCACGGGCAAATAGAACACGTTATGGTCTGGCGGCAGGCGTGTTTACTAAGAACGTGGAGACGGCGCACACAATGATGCGGGCACTGAAAGCTGGAACTGTGTGGATTAATTGCTTTGATGTTTTTGATGCTGCGATTCCTTTTGGTGGTTACAAGATGAGTGGTATTGGCAGGGAGAAAGGAATCTATAGTCTTCACAACTACCTTCAGGTGAAAGCTGTTGTCACACCATTGAACAATCCTGCTTGGATATAG 1689 0.4435 MIHKSKKVEDKTKKHKKSLTMAARRLSSWLLSRSLSSYSHSSGAASWLHSLGRNSGGWRNINRFSTAAAVEDLITPQVPIRYTQHLINGKFVDAASGKTFPAYDPRTGEVIANVAEGDVEDINRAVSAARKAFDEGPWPKMSAYERSRILLRFADLVEKHSDELAALETWNNGKPYEQAKTELPLFVRLFHYYAGWADKIHGLTVPADGDYHVQTLHEPVGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLTALFAAKLFHEAGLPEGVLNIVSGYGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAARSNLKPVTLELGGKSPFIVFDDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKSKKRALRRVVGDPFKKGVEQGPQIDGEQFEKVLRYIKSGIESNATLECGGDRLGSKGFFIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDTDEVIARANRTRYGLAAGVFTKNVETAHTMMRALKAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLNNPAWI 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04440 562 CDD ALDH_F2BC 80 554 - -
Viun3g04440 562 SUPERFAMILY ALDH-like 77 557 IPR016161 GO:0016491
Viun3g04440 562 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 332 521 IPR016163 GO:0016620
Viun3g04440 562 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 328 335 IPR029510 GO:0016491
Viun3g04440 562 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 69 552 - -
Viun3g04440 562 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 356 367 IPR016160 GO:0016491
Viun3g04440 562 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 87 351 - -
Viun3g04440 562 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 87 550 IPR016162 GO:0016491
Viun3g04440 562 FunFam Aldehyde dehydrogenase, putative 524 550 - -
Viun3g04440 562 Pfam Aldehyde dehydrogenase family 91 552 IPR015590 GO:0016491
Viun3g04440 562 FunFam Mitochondrial aldehyde dehydrogenase 2 334 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04440 Viun-Chr3 52219536 52223693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04440 21 562 Aldehyde Dehydrogenase Gene Family AT3G48000 80.147 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04440 K00128 - gmx:100811501 939.488