Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04432 ATGAAGAACTTGTACTGGTTTAAAGAAATGTCTAACAACGTAAGATCAGGGAGAAGGCTTTCGCTTGGGGAGTACAAGCGAGCGGTGTCATGGTCCAAGTATCTGATCTCTTCAGGGGCAGCCATAAAGGGAGAGGCTGAAGAAGAATGGAGTGCTGATCTGTCTCAGTTGTTCATTGGCTCAAAGTTTGCTTCTGGGAGACATAGCAGGATCTACAGAGGCATCTACAAGCACATGGATGTTGCAATTAAGCTTGTGAGTCAACCGGAGGAGGATGAGGAATTGGCTGTTTCGCTAGAGCAGCAATTCACTTCCGAGGTTAATTTGCTCTTTCGATTGCGCCATCCAAATATCATCACCTTTGTTGCAGCTTGCAAGAAACCTCCTGTGTTCTGCATTATTACTGAATATTTGTCCGGGGGTTCCTTGAGAAAATACTTGATTCAGGAAGGACCACACTCGGTTCCTCACAACGTTGTTCTGAAATTAGCCTTAGACATTGCTCGGGGAATGCAATATCTTCATTCTCAGGGTATACTTCACAGGGATCTGAAATCAGAAAACCTGCTGTTGGGGGAAGATCTGTGCGTAAAAGTAGCAGATTTTGGGATCTCGTGCTTGGAATCTCAGACCGGTAGTGCAAAAGGATTCACTGGAACATACCGTTGGATGGCACCTGAAATGATCAGAGAAAAACGTCACACAAAAAAAGTAGATGTCTATAGTTTCGCCATTGTTCTATGGGAACTCCTAACAGGGTTGACCCCATTTGACAACATGACACCAGAGCAAGCAGCATATGCAGCAACTCACAAGAATGAAAGGCCTCCGTTACCATGTGAGTGTCCAAGGGCATTTAGTCATCTCATAAACAGATGCTGGTCAAGCAATCCAGATAAAAGACCACATTTTGATGAGATAGTTGGGATTTTGGAGAGCTACAGTGAAGCACTTGAGGAGGATCCACAGTTTTTAACCACTTACAAACCACGTCCTAATAATCTTTTTCTCAGATGCTTACCCAAATGTAATACTACTCCCAATGTTTCTGCTTCTACCAAACCTTAA 1068 0.4373 MKNLYWFKEMSNNVRSGRRLSLGEYKRAVSWSKYLISSGAAIKGEAEEEWSADLSQLFIGSKFASGRHSRIYRGIYKHMDVAIKLVSQPEEDEELAVSLEQQFTSEVNLLFRLRHPNIITFVAACKKPPVFCIITEYLSGGSLRKYLIQEGPHSVPHNVVLKLALDIARGMQYLHSQGILHRDLKSENLLLGEDLCVKVADFGISCLESQTGSAKGFTGTYRWMAPEMIREKRHTKKVDVYSFAIVLWELLTGLTPFDNMTPEQAAYAATHKNERPPLPCECPRAFSHLINRCWSSNPDKRPHFDEIVGILESYSEALEEDPQFLTTYKPRPNNLFLRCLPKCNTTPNVSASTKP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04432 355 Pfam Protein tyrosine and serine/threonine kinase 59 310 IPR001245 GO:0004672|GO:0006468
Viun3g04432 355 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Viun3g04432 355 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Viun3g04432 355 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Viun3g04432 355 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Viun3g04432 355 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Viun3g04432 355 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 50 316 - -
Viun3g04432 355 SUPERFAMILY Protein kinase-like (PK-like) 45 311 IPR011009 -
Viun3g04432 355 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04432 355 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Viun3g04432 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Viun3g04432 355 CDD STKc_MAP3K-like 64 311 - -
Viun3g04432 355 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04432 355 Gene3D Phosphorylase Kinase; domain 1 46 139 - -
Viun3g04432 355 Gene3D Transferase(Phosphotransferase) domain 1 140 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04432 Viun-Chr3 52086149 52089355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04432 30 320 MAP Kinase Kinase Kinase AT1G62400 64.407 2.37e-136 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Viun3g04432 PK_Tyr_Ser-Thr 3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04432 - - gmx:100785212 669.077