Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04416 ATGGAAGAAACATTTGTTCCCTTGCGTGGGATCAAGAATGACCTCAAAGGAAGACTTGTGTGCTACAAACAAGATTGGACTAGTGGATTCCAAGCAGGCATCAGGATCCTTGCCCCAACTACATATATATTTTTCGCTTCAGCAATTCCAGTGATCTCTTTCGGGGAGCAACTGGAGAGAAACACAGATGGAACTCTAACTGCAGTGCAGACCCTTGCATCAACAGCACTCTGTGGCATTATCCATTCAATCTTAGGAGGGCAGCCCCTCCTGATACTTGGTGTAGCTGAGCCAACGGTTCTGATGTATACATTTTTGTATGACTTTGCAAAGGATAGAAAAGATTTGGGACACAAACTATTCCTTCCTTGGACTGGATGGGTGTGTGTTTGGACTGCTGCGTTGCTCTTCTTGCTGGCCATTGTTGGCGCATGCTCCATAATCAACAGATTCACGCGCCTTGCAGGTGAACTATTTGGTCTGCTGATTGCAATGCTCTTCATGCAGCAGGCGATAAGGGGACTTGTGGAAGAGTTCGGTGTGCCCCAGTCCCAGAGAGAAGGTACCAATCAGATTGCACTCCAATCTTCTTGGCTGTTTGGAAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTTCTGTTTACTGCACTAAGAAGCCGTAAGGCTAGATCCTGGCGATACGGAGCAGGTTGTTTGCGGGGATTTGTAGCTGATTATGGAGTCCCACTAATGATTCTGGTGTGGACTGCTGTGTCTTATATGCCAACCAATAAGGTTCCAAGGGGAATCCCTAGGCGACTTTTCAGTCCAAACCCATGGTCTCCCGGTGCATACACAAATTGGACAGTAATTAAGGAAATGTTGAATGTGCCTCTCATCTATATTATTGGAGCTTTTATACCAGCGACTATGATTGCCGTGCTTTATTACTTTGATCACAGTGTTGCTTCACAACTTGCCCAGCAAAAGGAGTTCAATCTAAGAAAACCCTCATCATATCATTATGACCTTCTCCTCTTGGGCTTCTTGACCATTTTGTGTGGGCTTATTGGAATCCCTCCATCCAACGGTGTGATTCCTCAATCTCCTATGCATACTAAAAGCTTAGCGACTCTAAAACATCAGATATTGCGTAACAAAGTTGTATCTGCCGCACGGAAAAGCATCCAGAAAAATATGAACCTGAATCAGCTATACCAAAGTATGCAAGAAGCATATGATCAAATGCAGACTCCCTTAGCCCACCAAATACCACCTCCCTCGGGGCTAAAGGAGATGAAGGAATCCACCATCCAACTGGCTCAAAGTCATGGATACATTGACACCCCTGTTGATGAGGTTGTTTTCGATGTGGATAAAGATATTGACGACCTTTTACCTGTTGAAGTAAAAGAACAGCGCCTCAGCAATCTGCTGCAGGCATTAATGGTTGCACTTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGCTTGCCCGGAAATCAGTTTTGGGAGAGAATATTATATCTCTTTACTGCTCCAAGTCGAAGATACAAAGTGCTGGAGAAACACCATGCGGCCTTTATTGAGACCGTGCCTTTCAAAACGGTGGCCATGTTTACATTATTCCAGACAGCTTACTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCCGGGGTCCTTTTCCCAATGTTAATCATGCTTCTTATCCCAGTACGTCAATATTTCCTTCCCAAGTTTTTTAAAGGAGCCCATCTTCAAGAATTGGATGCTGCAGCATATGAGGAAGCACCTGTTGTCAGTTTCAACTTGTCATTCGAAGATTCAGGTAGTCAGACAGCAACAGTCAATATTAATAGTGGGGAAATTCTTGATGAAATTATTACAAGGAGTCGTGGGGAGATCCTCAGTCAGAAATCCAGGAACTCAACTCCAACATCACGTGGACATACCATTCCTGCTTATGCAAATAACTCATAG 2016 0.441 MEETFVPLRGIKNDLKGRLVCYKQDWTSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSILGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGHKLFLPWTGWVCVWTAALLFLLAIVGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPQSQREGTNQIALQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGAGCLRGFVADYGVPLMILVWTAVSYMPTNKVPRGIPRRLFSPNPWSPGAYTNWTVIKEMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQILRNKVVSAARKSIQKNMNLNQLYQSMQEAYDQMQTPLAHQIPPPSGLKEMKESTIQLAQSHGYIDTPVDEVVFDVDKDIDDLLPVEVKEQRLSNLLQALMVALCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEKHHAAFIETVPFKTVAMFTLFQTAYLLLCFGLTWIPIAGVLFPMLIMLLIPVRQYFLPKFFKGAHLQELDAAAYEEAPVVSFNLSFEDSGSQTATVNINSGEILDEIITRSRGEILSQKSRNSTPTSRGHTIPAYANNS 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04416 671 Gene3D Helical hairpin bin 18 60 - -
Viun3g04416 671 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Viun3g04416 671 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016020
Viun3g04416 671 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Viun3g04416 671 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Viun3g04416 671 FunFam probable boron transporter 2 18 60 - -
Viun3g04416 671 MobiDBLite consensus disorder prediction 649 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04416 Viun-Chr3 51942952 51948009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04416 1 670 Antiporters AT3G62270 75.410 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04416 K24194 - gmx:100815420 1240.71