Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04415 ATGGAAGAAACATTTGTTCCCTTGCGTGGGATCAAGAATGACCTCAAAGGAAGACTTGTGTGCTACAAACAAGATTGGACTAGTGGATTCCAAGCAGGCATCAGGATCCTTGCCCCAACTACATATATATTTTTCGCTTCAGCAATTCCAGTGATCTCTTTCGGGGAGCAACTGGAGAGAAACACAGATGGAACTCTAACTGCAGTGCAGACCCTTGCATCAACAGCACTCTGTGGCATTATCCATTCAATCTTAGGAGGGCAGCCCCTCCTGATACTTGGTGTAGCTGAGCCAACGGTTCTGATGTATACATTTTTGTATGACTTTGCAAAGGATAGAAAAGATTTGGGACACAAACTATTCCTTCCTTGGACTGGATGGGTGTGTGTTTGGACTGCTGCGTTGCTCTTCTTGCTGGCCATTGTTGGCGCATGCTCCATAATCAACAGATTCACGCGCCTTGCAGGTGAACTATTTGGTCTGCTGATTGCAATGCTCTTCATGCAGCAGGCGATAAGGGGACTTGTGGAAGAGTTCGGTGTGCCCCAGTCCCAGAGAGAAGGTTGTTTGCGGGGATTTGTAGCTGATTATGGAGTCCCACTAATGATTCTGGTGTGGACTGCTGTGTCTTATATGCCAACCAATAAGGTTCCAAGGGGAATCCCTAGGCGACTTTTCAGTCCAAACCCATGGTCTCCCGGTGCATACACAAATTGGACAGTAATTAAGGAAATGTTGAATGTGCCTCTCATCTATATTATTGGAGCTTTTATACCAGCGACTATGATTGCCGTGCTTTATTACTTTGATCACAGTGTTGCTTCACAACTTGCCCAGCAAAAGGAGTTCAATCTAAGAAAACCCTCATCATATCATTATGACCTTCTCCTCTTGGGCTTCTTGACCATTTTGTGTGGGCTTATTGGAATCCCTCCATCCAACGGTGTGATTCCTCAATCTCCTATGCATACTAAAAGCTTAGCGACTCTAAAACATCAGATATTGCGTAACAAAGTTGTATCTGCCGCACGGAAAAGCATCCAGAAAAATATGAACCTGAATCAGCTATACCAAAGTATGCAAGAAGCATATGATCAAATGCAGACTCCCTTAGCCCACCAAATACCACCTCCCTCGCAGGGGCTAAAGGAGATGAAGGAATCCACCATCCAACTGGCTCAAAGTCATGGATACATTGACACCCCTGTTGATGAGGTTGTTTTCGATGTGGATAAAGATATTGACGACCTTTTACCTGTTGAAGTAAAAGAACAGCGCCTCAGCAATCTGCTGCAGGCATTAATGGTTGCACTTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGCTTGCCCGGAAATCAGTTTTGGGAGAGAATATTATATCTCTTTACTGCTCCAAGTCGAAGATACAAAGTGCTGGAGAAACACCATGCGGCCTTTATTGAGACCGTGCCTTTCAAAACGGTGGCCATGTTTACATTATTCCAGACAGCTTACTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCCGGGGTCCTTTTCCCAATGTTAATCATGCTTCTTATCCCAGTACGTCAATATTTCCTTCCCAAGTTTTTTAAAGGAGCCCATCTTCAAGAATTGGATGCTGCAGCATATGAGGAAGCACCTGTTGTCAGTTTCAACTTGTCATTCGAAGATTCAGGTAGTCAGACAGCAACAGTCAATATTAATAGTGGGGAAATTCTTGATGAAATTATTACAAGGAGTCGTGGGGAGATCCTCAGTCAGAAATCCAGGAACTCAACTCCAACATCACGTGGACATACCATTCCTGCTTATGCAAATAACTCATAG 1890 0.4407 MEETFVPLRGIKNDLKGRLVCYKQDWTSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSILGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGHKLFLPWTGWVCVWTAALLFLLAIVGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPQSQREGCLRGFVADYGVPLMILVWTAVSYMPTNKVPRGIPRRLFSPNPWSPGAYTNWTVIKEMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQILRNKVVSAARKSIQKNMNLNQLYQSMQEAYDQMQTPLAHQIPPPSQGLKEMKESTIQLAQSHGYIDTPVDEVVFDVDKDIDDLLPVEVKEQRLSNLLQALMVALCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEKHHAAFIETVPFKTVAMFTLFQTAYLLLCFGLTWIPIAGVLFPMLIMLLIPVRQYFLPKFFKGAHLQELDAAAYEEAPVVSFNLSFEDSGSQTATVNINSGEILDEIITRSRGEILSQKSRNSTPTSRGHTIPAYANNS 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04415 629 FunFam probable boron transporter 2 18 60 - -
Viun3g04415 629 Gene3D Helical hairpin bin 18 60 - -
Viun3g04415 629 MobiDBLite consensus disorder prediction 607 629 - -
Viun3g04415 629 PANTHER ANION EXCHANGE PROTEIN 187 568 IPR003020 GO:0005452|GO:0006820|GO:0016020
Viun3g04415 629 Pfam HCO3- transporter family 420 510 IPR011531 GO:0006820|GO:0016020
Viun3g04415 629 Pfam HCO3- transporter family 190 332 IPR011531 GO:0006820|GO:0016020
Viun3g04415 629 Pfam HCO3- transporter family 8 179 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04415 Viun-Chr3 51942952 51948047 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04415 1 628 Antiporters AT3G62270 70.896 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04415 K24194 - gmx:100815420 1131.32