Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04414 ATGGAAGAAACATTTGTTCCCTTGCGTGGGATCAAGAATGACCTCAAAGGAAGACTTGTGTGCTACAAACAAGATTGGACTAGTGGATTCCAAGCAGGCATCAGGATCCTTGCCCCAACTACATATATATTTTTCGCTTCAGCAATTCCAGTGATCTCTTTCGGGGAGCAACTGGAGAGAAACACAGATGGAACTCTAACTGCAGTGCAGACCCTTGCATCAACAGCACTCTGTGGCATTATCCATTCAATCTTAGGAGGGCAGCCCCTCCTGATACTTGGTGTAGCTGAGCCAACGGTTCTGATGTATACATTTTTGTATGACTTTGCAAAGGATAGAAAAGATTTGGGACACAAACTATTCCTTCCTTGGACTGGATGGTATCTCTTGATTTCCTTGAGTGGTGAACTATTTGGTCTGCTGATTGCAATGCTCTTCATGCAGCAGGCGATAAGGGGACTTGTGGAAGAGTTCGGTGTGCCCCAGTCCCAGAGAGAAGGTACCAATCAGATTGCACTCCAATCTTCTTGGCTGTTTGGAAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTTCTGTTTACTGCACTAAGAAGCCGTAAGGCTAGATCCTGGCGATACGGAGCAGGTTGTTTGCGGGGATTTGTAGCTGATTATGGAGTCCCACTAATGATTCTGGTGTGGACTGCTGTGTCTTATATGCCAACCAATAAGGTTCCAAGGGGAATCCCTAGGCGACTTTTCAGTCCAAACCCATGGTCTCCCGGTGCATACACAAATTGGACAGTAATTAAGGAAATGTTGAATGTGCCTCTCATCTATATTATTGGAGCTTTTATACCAGCGACTATGATTGCCGTGCTTTATTACTTTGATCACAGTGTTGCTTCACAACTTGCCCAGCAAAAGGAGTTCAATCTAAGAAAACCCTCATCATATCATTATGACCTTCTCCTCTTGGGCTTCTTGACCATTTTGTGTGGGCTTATTGGAATCCCTCCATCCAACGGTGTGATTCCTCAATCTCCTATGCATACTAAAAGCTTAGCGACTCTAAAACATCAGATATTGCGTAACAAAGTTGTATCTGCCGCACGGAAAAGCATCCAGAAAAATATGAACCTGAATCAGCTATACCAAAGTATGCAAGAAGCATATGATCAAATGCAGACTCCCTTAGCCCACCAAATACCACCTCCCTCGCAGGGGCTAAAGGAGATGAAGGAATCCACCATCCAACTGGCTCAAAGTCATGGATACATTGACACCCCTGTTGATGAGGTTGTTTTCGATGTGGATAAAGATATTGACGACCTTTTACCTGTTGAAGTAAAAGAACAGCGCCTCAGCAATCTGCTGCAGGCATTAATGGTTGCACTTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGCTTGCCCGGAAATCAGTTTTGGGAGAGAATATTATATCTCTTTACTGCTCCAAGTCGAAGATACAAAGTGCTGGAGAAACACCATGCGGCCTTTATTGAGACCGTGCCTTTCAAAACGGTGGCCATGTTTACATTATTCCAGACAGCTTACTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCCGGGGTCCTTTTCCCAATGTTAATCATGCTTCTTATCCCAGTACGTCAATATTTCCTTCCCAAGTTTTTTAAAGGAGCCCATCTTCAAGAATTGGATGCTGCAGCATATGAGGAAGCACCTGTTGTCAGTTTCAACTTGTCATTCGAAGATTCAGGTAGTCAGACAGCAACAGTCAATATTAATAGTGGGGAAATTCTTGATGAAATTATTACAAGGAGTCGTGGGGAGATCCTCAGTCAGAAATCCAGGAACTCAACTCCAACATCACGTGGACATACCATTCCTGCTTATGCAAATAACTCATAG 1956 0.4366 MEETFVPLRGIKNDLKGRLVCYKQDWTSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSILGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGHKLFLPWTGWYLLISLSGELFGLLIAMLFMQQAIRGLVEEFGVPQSQREGTNQIALQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGAGCLRGFVADYGVPLMILVWTAVSYMPTNKVPRGIPRRLFSPNPWSPGAYTNWTVIKEMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQILRNKVVSAARKSIQKNMNLNQLYQSMQEAYDQMQTPLAHQIPPPSQGLKEMKESTIQLAQSHGYIDTPVDEVVFDVDKDIDDLLPVEVKEQRLSNLLQALMVALCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEKHHAAFIETVPFKTVAMFTLFQTAYLLLCFGLTWIPIAGVLFPMLIMLLIPVRQYFLPKFFKGAHLQELDAAAYEEAPVVSFNLSFEDSGSQTATVNINSGEILDEIITRSRGEILSQKSRNSTPTSRGHTIPAYANNS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04414 651 PANTHER ANION EXCHANGE PROTEIN 2 590 IPR003020 GO:0005452|GO:0006820|GO:0016020
Viun3g04414 651 FunFam probable boron transporter 2 18 60 - -
Viun3g04414 651 Pfam HCO3- transporter family 442 532 IPR011531 GO:0006820|GO:0016020
Viun3g04414 651 Pfam HCO3- transporter family 183 354 IPR011531 GO:0006820|GO:0016020
Viun3g04414 651 Pfam HCO3- transporter family 8 131 IPR011531 GO:0006820|GO:0016020
Viun3g04414 651 Gene3D Helical hairpin bin 18 60 - -
Viun3g04414 651 MobiDBLite consensus disorder prediction 629 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04414 Viun-Chr3 51942952 51948049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04414 1 650 Antiporters AT3G62270 72.321 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04414 K24194 - gmx:100815420 1174.07