Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04413 ATGGAAGAAACATTTGTTCCCTTGCGTGGGATCAAGAATGACCTCAAAGGAAGACTTGTGTGCTACAAACAAGATTGGACTAGTGGATTCCAAGCAGGCATCAGGATCCTTGCCCCAACTACATATATATTTTTCGCTTCAGCAATTCCAGTGATCTCTTTCGGGGAGCAACTGGAGAGAAACACAGATGGAACTCTAACTGCAGTGCAGACCCTTGCATCAACAGCACTCTGTGGCATTATCCATTCAATCTTAGGAGGGCAGCCCCTCCTGATACTTGGTGTAGCTGAGCCAACGGTTCTGATGTATACATTTTTGTATGACTTTGCAAAGGATAGAAAAGATTTGGGACACAAACTATTCCTTCCTTGGACTGGATGGTATCTCTTGATTTCCTTGAGTGGTGAACTATTTGGTCTGCTGATTGCAATGCTCTTCATGCAGCAGGCGATAAGGGGACTTGTGGAAGAGTTCGGTGTGCCCCAGTCCCAGAGAGAAGGTTGTTTGCGGGGATTTGTAGCTGATTATGGAGTCCCACTAATGATTCTGGTGTGGACTGCTGTGTCTTATATGCCAACCAATAAGGTTCCAAGGGGAATCCCTAGGCGACTTTTCAGTCCAAACCCATGGTCTCCCGGTGCATACACAAATTGGACAGTAATTAAGGAAATGTTGAATGTGCCTCTCATCTATATTATTGGAGCTTTTATACCAGCGACTATGATTGCCGTGCTTTATTACTTTGATCACAGTGTTGCTTCACAACTTGCCCAGCAAAAGGAGTTCAATCTAAGAAAACCCTCATCATATCATTATGACCTTCTCCTCTTGGGCTTCTTGACCATTTTGTGTGGGCTTATTGGAATCCCTCCATCCAACGGTGTGATTCCTCAATCTCCTATGCATACTAAAAGCTTAGCGACTCTAAAACATCAGATATTGCGTAACAAAGTTGTATCTGCCGCACGGAAAAGCATCCAGAAAAATATGAACCTGAATCAGCTATACCAAAGTATGCAAGAAGCATATGATCAAATGCAGACTCCCTTAGCCCACCAAATACCACCTCCCTCGCAGGGGCTAAAGGAGATGAAGGAATCCACCATCCAACTGGCTCAAAGTCATGGATACATTGACACCCCTGTTGATGAGGTTGTTTTCGATGTGGATAAAGATATTGACGACCTTTTACCTGTTGAAGTAAAAGAACAGCGCCTCAGCAATCTGCTGCAGGCATTAATGGTTGCACTTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGCTTGCCCGGAAATCAGTTTTGGGAGAGAATATTATATCTCTTTACTGCTCCAAGTCGAAGATACAAAGTGCTGGAGAAACACCATGCGGCCTTTATTGAGACCGTGCCTTTCAAAACGGTGGCCATGTTTACATTATTCCAGACAGCTTACTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCCGGGGTCCTTTTCCCAATGTTAATCATGCTTCTTATCCCAGTACGTCAATATTTCCTTCCCAAGTTTTTTAAAGGAGCCCATCTTCAAGAATTGGATGCTGCAGCATATGAGGAAGCACCTGTTGTCAGTTTCAACTTGTCATTCGAAGATTCAGGTAGTCAGACAGCAACAGTCAATATTAATAGTGGGGAAATTCTTGATGAAATTATTACAAGGAGTCGTGGGGAGATCCTCAGTCAGAAATCCAGGAACTCAACTCCAACATCACGTGGACATACCATTCCTGCTTATGCAAATAACTCATAG 1827 0.4357 MEETFVPLRGIKNDLKGRLVCYKQDWTSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSILGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGHKLFLPWTGWYLLISLSGELFGLLIAMLFMQQAIRGLVEEFGVPQSQREGCLRGFVADYGVPLMILVWTAVSYMPTNKVPRGIPRRLFSPNPWSPGAYTNWTVIKEMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQILRNKVVSAARKSIQKNMNLNQLYQSMQEAYDQMQTPLAHQIPPPSQGLKEMKESTIQLAQSHGYIDTPVDEVVFDVDKDIDDLLPVEVKEQRLSNLLQALMVALCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEKHHAAFIETVPFKTVAMFTLFQTAYLLLCFGLTWIPIAGVLFPMLIMLLIPVRQYFLPKFFKGAHLQELDAAAYEEAPVVSFNLSFEDSGSQTATVNINSGEILDEIITRSRGEILSQKSRNSTPTSRGHTIPAYANNS 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04413 608 PANTHER ANION EXCHANGE PROTEIN 166 547 IPR003020 GO:0005452|GO:0006820|GO:0016020
Viun3g04413 608 Pfam HCO3- transporter family 8 131 IPR011531 GO:0006820|GO:0016020
Viun3g04413 608 Pfam HCO3- transporter family 169 311 IPR011531 GO:0006820|GO:0016020
Viun3g04413 608 Pfam HCO3- transporter family 399 489 IPR011531 GO:0006820|GO:0016020
Viun3g04413 608 Gene3D Helical hairpin bin 18 60 - -
Viun3g04413 608 FunFam probable boron transporter 2 18 60 - -
Viun3g04413 608 MobiDBLite consensus disorder prediction 586 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04413 Viun-Chr3 51942952 51948052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04413 1 607 Antiporters AT3G62270 67.761 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04413 K24194 - gmx:100815420 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04413 3 51942952 51948052 Viun3g04413 3 51942952 51948052 ECH
Viun3g04413 3 51942952 51948052 Viun9g01218 9 11541853 11547769 PCT