Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04412 ATGGAAGAAACATTTGTTCCCTTGCGTGGGATCAAGAATGACCTCAAAGGAAGACTTGTGTGCTACAAACAAGATTGGACTAGTGGATTCCAAGCAGGCATCAGGATCCTTGCCCCAACTACATATATATTTTTCGCTTCAGCAATTCCAGTGATCTCTTTCGGGGAGCAACTGGAGAGAAACACAGATGGAACTCTAACTGCAGTGCAGACCCTTGCATCAACAGCACTCTGTGGCATTATCCATTCAATCTTAGGAGGGCAGCCCCTCCTGATACTTGGTGTAGCTGAGCCAACGGTTCTGATGTATACATTTTTGTATGACTTTGCAAAGGATAGAAAAGATTTGGGACACAAACTATTCCTTCCTTGGACTGGATGGGTGTGTGTTTGGACTGCTGCGTTGCTCTTCTTGCTGGCCATTGTTGGCGCATGCTCCATAATCAACAGATTCACGCGCCTTGCAGGTGAACTATTTGGTCTGCTGATTGCAATGCTCTTCATGCAGCAGGCGATAAGGGGACTTGTGGAAGAGTTCGGTGTGCCCCAGTCCCAGAGAGAAGGTACCAATCAGATTGCACTCCAATCTTCTTGGCTGTTTGGAAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTTCTGTTTACTGCACTAAGAAGCCGTAAGGCTAGATCCTGGCGATACGGAGCAGGTTGTTTGCGGGGATTTGTAGCTGATTATGGAGTCCCACTAATGATTCTGGTGTGGACTGCTGTGTCTTATATGCCAACCAATAAGGTTCCAAGGGGAATCCCTAGGCGACTTTTCAGTCCAAACCCATGGTCTCCCGGTGCATACACAAATTGGACAGTAATTAAGGAAATGTTGAATGTGCCTCTCATCTATATTATTGGAGCTTTTATACCAGCGACTATGATTGCCGTGCTTTATTACTTTGATCACAGTGTTGCTTCACAACTTGCCCAGCAAAAGGAGTTCAATCTAAGAAAACCCTCATCATATCATTATGACCTTCTCCTCTTGGGCTTCTTGACCATTTTGTGTGGGCTTATTGGAATCCCTCCATCCAACGGTGTGATTCCTCAATCTCCTATGCATACTAAAAGCTTAGCGACTCTAAAACATCAGATATTGCGTAACAAAGTTGTATCTGCCGCACGGAAAAGCATCCAGAAAAATATGAACCTGAATCAGCTATACCAAAGTATGCAAGAAGCATATGATCAAATGCAGACTCCCTTAGCCCACCAAATACCACCTCCCTCGCAGGGGCTAAAGGAGATGAAGGAATCCACCATCCAACTGGCTCAAAGTCATGGATACATTGACACCCCTGTTGATGAGGTTGTTTTCGATGTGGATAAAGATATTGACGACCTTTTACCTGTTGAAGTAAAAGAACAGCGCCTCAGCAATCTGCTGCAGGCATTAATGGTTGCACTTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGCTTGCCCGGAAATCAGTTTTGGGAGAGAATATTATATCTCTTTACTGCTCCAAGTCGAAGATACAAAGTGCTGGAGAAACACCATGCGGCCTTTATTGAGACCGTGCCTTTCAAAACGGTGGCCATGTTTACATTATTCCAGACAGCTTACTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCCGGGGTCCTTTTCCCAATGTTAATCATGCTTCTTATCCCAGTACGTCAATATTTCCTTCCCAAGTTTTTTAAAGGAGCCCATCTTCAAGAATTGGATGCTGCAGCATATGAGGAAGCACCTGTTGTCAGTTTCAACTTGTCATTCGAAGATTCAGGTAGTCAGACAGCAACAGTCAATATTAATAGTGGGGAAATTCTTGATGAAATTATTACAAGGAGTCGTGGGGAGATCCTCAGTCAGAAATCCAGGAACTCAACTCCAACATCACGTGGACATACCATTCCTGCTTATGCAAATAACTCATAG 2019 0.4413 MEETFVPLRGIKNDLKGRLVCYKQDWTSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSILGGQPLLILGVAEPTVLMYTFLYDFAKDRKDLGHKLFLPWTGWVCVWTAALLFLLAIVGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPQSQREGTNQIALQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGAGCLRGFVADYGVPLMILVWTAVSYMPTNKVPRGIPRRLFSPNPWSPGAYTNWTVIKEMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQILRNKVVSAARKSIQKNMNLNQLYQSMQEAYDQMQTPLAHQIPPPSQGLKEMKESTIQLAQSHGYIDTPVDEVVFDVDKDIDDLLPVEVKEQRLSNLLQALMVALCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEKHHAAFIETVPFKTVAMFTLFQTAYLLLCFGLTWIPIAGVLFPMLIMLLIPVRQYFLPKFFKGAHLQELDAAAYEEAPVVSFNLSFEDSGSQTATVNINSGEILDEIITRSRGEILSQKSRNSTPTSRGHTIPAYANNS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04412 672 Gene3D Helical hairpin bin 18 60 - -
Viun3g04412 672 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016020
Viun3g04412 672 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Viun3g04412 672 Pfam HCO3- transporter family 463 553 IPR011531 GO:0006820|GO:0016020
Viun3g04412 672 FunFam probable boron transporter 2 18 60 - -
Viun3g04412 672 PANTHER ANION EXCHANGE PROTEIN 2 611 IPR003020 GO:0005452|GO:0006820|GO:0016020
Viun3g04412 672 MobiDBLite consensus disorder prediction 650 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04412 Viun-Chr3 51942440 51948043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04412 1 671 Antiporters AT3G62270 75.446 0.0 1029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04412 K24194 - gmx:100815420 1236.86