Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04410 ATGCAGAGCATACTTCTTTCTCTTTCTCCTTTGGTCTCTCTCCGCAGACTTCACACTCCTCTGTCTCCTTCCACAGCCAAACTCAACCACATTCTCACTTCCTCTTCCTCTTTTTCTTCATTCCCATGTCAACCATCTTCTCCTTCTTCTTTCAAACTTGTTCCCTCTCTTCCCTTGCTCCATGCCGGACCAACCTCCGTGCCGGAGGGCAGTGCCGCCGAGTTTCCTGGGGTTAACAGTCTGTTTAACATTCTGGAGATGGGTTCCTTGTTTGGGTTCTGGATCCTCTTCAACATCTACTTTAACATCTATAACAAACAGGTCTTAAAAGTTTACCATTTGCCTTTAACCGTTAGCACGATTCAGTTTGCCGTAGGGGCTCTCCTTGTAGCGTTCATGTGGGGTTTTAATCTATACAAGAGGCCAAAACTGAGTGGCGCGCAGCTTGCAGCGATATGGCCACTGGCTTTGGTTCATACTTTAGGAAATCTTTTTACTAACATGAGCCTTGGGAAGGTTGCTGTGTCTTTCACTCATACAATAAAAGCTATGGAACCTTTTTTTTCAGTGCTCCTTTCTGCTATGTTTCTTGGAGAGAATCCTACCCCATGGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGGGTAGCGCTAGCATCTGCCACCGAGGCCTCTTTCAATTGGGTTGGATTTTGGAGTGCAATGGCTTCCAATTTGACCAATCAATCTCGTAATGTTCTTAGCAAGAAGCTTATGGTTAACACGGAGGAATCTATAGACAACATAACTCTCTTCTCAATCATAACGGTTATGTCCTTCTTTATATCCGCACCTGTAACTTTGTTAATAGAGGGCGTTAAATTTACCCCTTCTTACCTGCAATCTTCTGGATTAAATGTTAACGAAGTGTACATCAGATGTCTTCTTGCTGCACTATGTTTCCATGCCTATCAGCAAGTTGCTTATATGATATTGGAGAAGGTGTCACCTGTTACGCATTCGGTAGGAAATTGTGTGAAAAGGGTTGTGGTCATCGTGAGCTCAGTCATTTTCTTCCGAACTCCAGTATCACCTATTAACGCACTTGGCACTGCTATAGCTCTTGCTGGTGTTTTCCTGTATTCTAGGGTGAAGTGA 1137 0.4424 MQSILLSLSPLVSLRRLHTPLSPSTAKLNHILTSSSSFSSFPCQPSSPSSFKLVPSLPLLHAGPTSVPEGSAAEFPGVNSLFNILEMGSLFGFWILFNIYFNIYNKQVLKVYHLPLTVSTIQFAVGALLVAFMWGFNLYKRPKLSGAQLAAIWPLALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAMFLGENPTPWVVGSLVPIVGGVALASATEASFNWVGFWSAMASNLTNQSRNVLSKKLMVNTEESIDNITLFSIITVMSFFISAPVTLLIEGVKFTPSYLQSSGLNVNEVYIRCLLAALCFHAYQQVAYMILEKVSPVTHSVGNCVKRVVVIVSSVIFFRTPVSPINALGTAIALAGVFLYSRVK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04410 378 Pfam Triose-phosphate Transporter family 86 375 IPR004853 -
Viun3g04410 378 PANTHER SOLUTE CARRIER FAMILY 35 87 378 - -
Viun3g04410 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 130 220 - -
Viun3g04410 378 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 85 378 IPR004696 GO:0016020|GO:0022857|GO:0055085
Viun3g04410 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 306 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04410 Viun-Chr3 51915592 51918521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04410 65 378 Antiporters AT5G33320 75.796 1.29e-166 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04410 K15283 - gmx:100780925 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04410 3 51915592 51918521 Viun9g01233 9 11857032 11860598 ECH
Viun3g04410 3 51915592 51918521 Viun3g04410 3 51915592 51918521 ECH
Viun3g04410 3 51915592 51918521 Viun9g01233 9 11857032 11860598 PCT