Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04394 ATGGAAGTCCCCAAATCCCCTTCCAAATACAAACGAATCGCCAATCACAAATTGCTTATAAAATTCGGTTTAGTCATTTTGGTCATGCTGCTATTGTTTCTGGGTTTTTATCTCGAGTCAGAAACCGGAAAACTCAATGCGTCGTCGTCTTACACTGTGGTCGTGGATTGTGGAAGCACTGGGACACGGGTGAATGTGTATGAGTGGATGGTAGGGGTGAAGGGAACGAGCAAAGGGAACTTGCCAGTGTTGCTGCACTCCTATCCTGATAACACAACCAGGAAGAGTTCACTTTGGAAAGGTTCTTGTCAATATCACTGTATGCAAACTCAACCCGGGTTACACAACTTTGTTAATGATTCTTTAGGAGTGAGACAGGCTTTGGAACCCTTGATTGTGTGGGCGGAGCAAGTGGTGCCGCGAGAAATGCGCGGCAACACTCCTGCTTTTGTCTTGGCTACTGCTGGGTTGAGGGGGCTACCCAAGGAGGACGCTGATAGGGTATTGGGAGATATTGAGGCTGTTGTGAAAGGTCATAGCTTTATGATGAGCAAGAGCTGGATAAGGGTTTTGAGTGGGAAGGAGGAAGCTTATTATGGCTGGGTGGCTTTGAACTATAAAATGGGCACTTTTGATTATAACTATCCCAAGTCTCCCACTTTGGGACTTGTTGATATTGGAGGCTCGTCATTGCAGATTGTGGCAGAGATAGATGTTGCTGGTGATGATGTGCATGTGATGAAATCAAGGCTCGGATCAATGGAGCATCGGATTATGGCATATTCATTGCCTGCATTTGGCCTAAATAAAGCGTTTGATAGGACAGTTCTTATGCTCAGAAACAATCAAAGTGTGGAAAGAACTGCCAGTATCTCTGAGCTCAGACATCCTTGTCTGGTATCAACTTATGTACAAAACTATACATGCCATTCTTGCTCTGGATTGGCTTCCATTTATGAGAAAAATCACAGTCAACACCAGGCAAGTGAGCTTTATTCTTTACGTCTTACTGGAGAACCTAATTGGGAGCAATGCAAAGAACTAGCTATTGGTGCCGCCATGAACTCGAGTTCTAAAGTGTCACATCTGACAGTTAGCAAAAATTGCCAAGCTAGTTCATTTTCTGGTACTGGCACTGGTATACTTAATTTAACAGCTGTTGCACAACCAGCCAAGTTTCATGCATTGTCTGGTTTCTTTTTTGTCTACAGTAAGCTAGATTTGAGCCCAAGAACCAACTTAACAATGGTTTGGGAGTCAGGCAAACAAATATGTTCAAATTTATGGTCTGGTTTGAGCAGTGTTTCTGATAATCCAAATTATGCTGGACAATTTTGTTTCCAGGTGGCTTATATGGCATCATTGATTGATTATGGTCTCTGTCTTGGTGATGTTGAAATGGTATTTGGCCCAGGTGACATTTCGTGGACTTTAGGAGCTGCATTGATTGAAGGGAAATTTTTGTGGTTAAACAGTACAAGCTACAAAGCTCATGTTATCATTTCAACTTTAAAGAATGTCAAGGTCACGTCTTCTCCTACTGTTCTATTTGCTGTACTCGTATTACTTTCATTGATTGTTTATTGTAGTCAAATTAAGCTACCAATGCCAAGTAGAAGGGATTCTGCTCCTGGCTCATCTTTGCCATCTTATACTCCTGTAAGACGTCAGGGTGTGGTATGGCGGTGGAGCAACCTTAAAGCTCCACCCACCATTAACGTGAGAGTAAGGAACAGCAGGGAATTGATAGACATGCGAACTCTGTACCCAACTGTCGCTGCTCCTCTTTCTCTTTCAAACTTTTCCCTTAGGACCAATTTCCCTGTTCGATGCAGTAACCTTCACTCGCAACCGCAACTGGACACGCGCAAGTTAGTTCTTTCAGTGAAGGAAAAGCTCGAAAAAGAACACCACAGCCTTCCTGTTGGAAGAAATGGAAGGGATGACGAAGATATGATACTGTGGTTTCTCAAAGATCGCAAGTTTTCTGTTGAAGATGCTATTTCCAAGTTGACTAAAACCATTAAATGGCGTCAAGATTTTGAGGTGTCCAAATTGACCGATGAAACTGTTAAAGATGCTGCTGAAACTGGAAAAGGATACGTACACGACTTTCTAGATATTAATGATAGACCTGTGCTTGTGGTGGTTGGATCAAAGCATATTCCTATGGCAGTGGACCCTGCAGACGATGAGAGGCTGTGTGTTTTCTTAATTGAGAAGGCATTGAGTAAGCTTCCAACTGGGAAAGAAAAAATTCTTGGAATAGTTGATCTCAGAGGCTTCAGAACAGAAAATGCTGATCTTAAATTCTTGACTTTCTTGTTTGATGTATTTTATTATTACTATCCGAAGAGATTGGATCAAGTACTATTTGTGGATGCACCTTTTGTTTTTAAGCCAATTTGGCAGCTAGCCAAACCCTTGTTAAAATCATATACTTCCCTGGTGAGATTTTGCTCCGCAGAGACTGTTAGGAAGGAATATTTTACAGAAGAAACTTTGCCACCAAACTTCAGAGACTGA 2526 0.4212 MEVPKSPSKYKRIANHKLLIKFGLVILVMLLLFLGFYLESETGKLNASSSYTVVVDCGSTGTRVNVYEWMVGVKGTSKGNLPVLLHSYPDNTTRKSSLWKGSCQYHCMQTQPGLHNFVNDSLGVRQALEPLIVWAEQVVPREMRGNTPAFVLATAGLRGLPKEDADRVLGDIEAVVKGHSFMMSKSWIRVLSGKEEAYYGWVALNYKMGTFDYNYPKSPTLGLVDIGGSSLQIVAEIDVAGDDVHVMKSRLGSMEHRIMAYSLPAFGLNKAFDRTVLMLRNNQSVERTASISELRHPCLVSTYVQNYTCHSCSGLASIYEKNHSQHQASELYSLRLTGEPNWEQCKELAIGAAMNSSSKVSHLTVSKNCQASSFSGTGTGILNLTAVAQPAKFHALSGFFFVYSKLDLSPRTNLTMVWESGKQICSNLWSGLSSVSDNPNYAGQFCFQVAYMASLIDYGLCLGDVEMVFGPGDISWTLGAALIEGKFLWLNSTSYKAHVIISTLKNVKVTSSPTVLFAVLVLLSLIVYCSQIKLPMPSRRDSAPGSSLPSYTPVRRQGVVWRWSNLKAPPTINVRVRNSRELIDMRTLYPTVAAPLSLSNFSLRTNFPVRCSNLHSQPQLDTRKLVLSVKEKLEKEHHSLPVGRNGRDDEDMILWFLKDRKFSVEDAISKLTKTIKWRQDFEVSKLTDETVKDAAETGKGYVHDFLDINDRPVLVVVGSKHIPMAVDPADDERLCVFLIEKALSKLPTGKEKILGIVDLRGFRTENADLKFLTFLFDVFYYYYPKRLDQVLFVDAPFVFKPIWQLAKPLLKSYTSLVRFCSAETVRKEYFTEETLPPNFRD 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04394 841 Gene3D - 607 839 IPR036865 -
Viun3g04394 841 CDD SEC14 692 839 IPR001251 -
Viun3g04394 841 Gene3D - 39 192 - -
Viun3g04394 841 SMART sec14_4 694 839 IPR001251 -
Viun3g04394 841 SUPERFAMILY CRAL/TRIO N-terminal domain 624 689 IPR036273 -
Viun3g04394 841 SUPERFAMILY CRAL/TRIO domain 689 829 IPR036865 -
Viun3g04394 841 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 592 841 - -
Viun3g04394 841 Pfam GDA1/CD39 (nucleoside phosphatase) family 46 484 IPR000407 GO:0016787
Viun3g04394 841 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 690 841 IPR001251 -
Viun3g04394 841 Pfam CRAL/TRIO domain 696 836 IPR001251 -
Viun3g04394 841 Gene3D Exopolyphosphatase. Domain 2 193 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04394 Viun-Chr3 51783887 51798815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04394 14 488 Nodulin-like Gene Family AT4G19180 35.234 7.24e-84 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04394 - - vun:114175521 1666.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04394 3 51783887 51798815 Viun3g04394 3 51783887 51798815 ECH