Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04376 ATGGAAGATGTGAATCACACCCCAAGAGAAGCAAAGGATTACTATTCTAGACCAATATGGTTGCTAGAAACTGCGCAAGCATTTGGAGATCTCAAGAGAAGTGACAGAAATGGAGTTAATGGCTTCCATTTTACTGCTGGTAGAGATTCCTTCGTCTATAACTCCCAAGAAATAATGACTCCTGAAATTTCTGGAGCATTCGAAGAAATCAAAAGTTTATTTAGTAGCAGAAATGGCGTTAATGATGAGGTTGTTGACCAAGAAAACGGTGACTATGGCCGCTATTCTTTACAAACGTTGTCAACAGAAATTGTGGAAATAGTTGAGGATGGCAACAGCATAACAAAAAACAAAGATAGAAGGGTTGATGATCTTTATGTTGCTGTTGGCAAAGATGACTTGGATGCAGTGAAATGGGCTCTTGATCATGCTGTTTCTCCCGGTTCCCGGATTTTTCTTATCCACGTCTCTTCTCCGATCACATCGATTCCTACTCCAGTTGGAAGGTTTGAAAGAAGTAAACTGACCCCACAGCAAGTGAGACTATACGTGAATGAAGTGAACAACAAGAGGAAGGATCTTTTGCAGAAGTACATTAAGATGAGTAATGAAGCCAATGTAATAGCAGAAACGTTGCTTCTGGAGAGCAATGACACGGGAAAAGCAATTCTGGATCTCATCTCCATACTTAACATAACCAACCTTGTCATTGGAATCAAAAAGCTACCTTACACACGGCGCAACAACAAATTGAGCATTGGAGAGTTCGTAAAGAAACATGCACCGAATACCTGTGAAGTTACTTTGGTTTATAACGGCGAGGTGTTTGTGTCTGACCCTTACATGGATGGCTTGGTATCCTATGGCCAAGCATCACAGAGTAAAAATCATTCTAAAAGCAACTTCTTACAGTGCATGTGCTTTTCAGGGTGCATGAAAGAAGATGATGGTAGATAG 957 0.4065 MEDVNHTPREAKDYYSRPIWLLETAQAFGDLKRSDRNGVNGFHFTAGRDSFVYNSQEIMTPEISGAFEEIKSLFSSRNGVNDEVVDQENGDYGRYSLQTLSTEIVEIVEDGNSITKNKDRRVDDLYVAVGKDDLDAVKWALDHAVSPGSRIFLIHVSSPITSIPTPVGRFERSKLTPQQVRLYVNEVNNKRKDLLQKYIKMSNEANVIAETLLLESNDTGKAILDLISILNITNLVIGIKKLPYTRRNNKLSIGEFVKKHAPNTCEVTLVYNGEVFVSDPYMDGLVSYGQASQSKNHSKSNFLQCMCFSGCMKEDDGR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04376 318 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 86 312 - -
Viun3g04376 318 Gene3D HUPs 120 278 IPR014729 -
Viun3g04376 318 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 132 270 - -
Viun3g04376 318 Pfam Universal stress protein family 133 257 IPR006016 -
Viun3g04376 318 Coils Coil 184 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04376 Viun-Chr3 51541160 51543038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04376 123 302 U-box Gene Family AT3G61390 27.957 1.73e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04376 - - pvu:PHAVU_003G204300g 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04376 3 51541160 51543038 Viun3g04376 3 51541160 51543038 ECH