Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04373 ATGGGATCTGAACTCCTGCATAACAATAACAACGGTAATGATACTATTAAGTTCCTCTGTAGCTACGGCGGCAAGATCCTTCCTCGCCGTACCGACGGCATCCTCCGATACTACGGCGGCCACACCAGAGTCCTCGCTTTCCATCCTTCCACTTCATTCTCAGAGTTAATGACAAAGATTAACGAGCTGTGCGGTTCGCCGGCTACACTCCGGTGTCCACTGCCAAACGGGGACTTGGACACCTTGGTTTCTGTAAAAAACGACGAAGATTTGGCGAATATAATCGAGGAATACGATCGAGCTTCTTCATCCTTACCTCATCGGTTGAAGATCAGAGCCATTCTTTTGCCGATGGACAAATCCTCTCCTTCTCCATCTTCTTCGTCCAGCGCCTCTCACACTCCGCCTGGTTCGCCTCACACTTCCGCCAGTTCCCCGTCGTGTTCTGAGACTCACCGGTTCGGCTGCTGGAACTGCTCAGCAACAGCAACTGCGTATTCTAGATGGCCCCGTAACGGAGCGGTAAAATTCGGCTCACCTCACTCCTCTCCCTGTTCCCTGCCGTGCTACGCGGTGCAGCGGTTCGGTTGCAGGAATTGTTCCTCGGGTGCTTATCCTACCAGCGTCCGTATTGGAGCGGCGAAATTCGGTTCTCCTCAATCCTCCGGCGGCTCCCCGCCGTATTCCGTGGCCCACCGGTTCGGCTGCCAGGATTGCTCGCTAATTTCGTATCCAATTGGCGTCTGTAACGCGGCAGCAAAAGGATGTTAG 771 0.5383 MGSELLHNNNNGNDTIKFLCSYGGKILPRRTDGILRYYGGHTRVLAFHPSTSFSELMTKINELCGSPATLRCPLPNGDLDTLVSVKNDEDLANIIEEYDRASSSLPHRLKIRAILLPMDKSSPSPSSSSSASHTPPGSPHTSASSPSCSETHRFGCWNCSATATAYSRWPRNGAVKFGSPHSSPCSLPCYAVQRFGCRNCSSGAYPTSVRIGAAKFGSPQSSGGSPPYSVAHRFGCQDCSLISYPIGVCNAAAKGC 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04373 256 SMART PB1_new 30 116 IPR000270 GO:0005515
Viun3g04373 256 MobiDBLite consensus disorder prediction 120 145 - -
Viun3g04373 256 CDD PB1_UP2 19 115 - -
Viun3g04373 256 SUPERFAMILY CAD & PB1 domains 32 121 - -
Viun3g04373 256 Gene3D - 35 115 - -
Viun3g04373 256 PANTHER OS05G0427100 PROTEIN-RELATED 14 151 - -
Viun3g04373 256 Pfam PB1 domain 35 109 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04373 Viun-Chr3 51464279 51465632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04373 14 125 MAP Kinase Kinase Kinase AT1G04700 45.536 1.49e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04373 - - vun:114177582 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04373 3 51464279 51465632 Viun3g04373 3 51464279 51465632 ECH
Viun3g04373 3 51464279 51465632 Viun9g01340 9 13380481 13382443 PCT