Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04358 AACGAAAAAGCTTTAATCAATAAGAAGCAGGTGGTGCTTGACTGTGGCTATAAATGTTTGAGGGGCCTGGTTACAGTGTCACGAGTGTACGATGAAATGAAAGAAATGATGATTTGTAACTTTTATCTATCTCTTTTGTTCTTCATCAGCGTCCTTTGTGTGTTGAAGTTCGCAACAAAAACAAAAACCAAACCCAAAACCAAACTGAATTTACCCCCATCACCACCAAAACTACCATTCATAGGCAATCTTCATCAGTTTGGCACTCTTCCACACCGCTCTCTTCGAAACCTCTCACTCAACCATGGTGGTATCATGTTACTGCAGTTGGGGCAGATGGAGAATCCAACTCTGGTGGTTTCATCCGCAGAGGCGGTCACGGAAATCATGAAAACCCATGACCTGGCCTTTTCCGACCGACCCCAAAACATTGCTGCAAAAATCTTACTCTATGGTTGTACTAACATCGCCTTTTCACTCTATGGCCAAAATTGGAGACACAAAAGGAAAATAAGTGTCCTTCAACTTCTCAACATGAAAAGGGTTCAATCACTTCATCAAATCAGAGAAGAAGAAGTTGCCAACTTGGTGAATAAGCTACGTGATGTGAGCTCCAGTGATGATGAGTGCTATGTGAATCTGAGCGAAATGCTTATGTCCACATCCAGCGACGTCGCGTGTAAATGTGCTCTCGGACGGAAATACTCCGGCGATGGTCACAGCAGAGTGAAAGAGTTAGCGAACGATGTTATGCATCAGCTTGTGGCCTTCACTGTGGGAGATTACTTCCCTTTGCTGGGTTGGGTTGATTTTCTCACTGGAAAAATTCAGGAGTATAAGGCCACTTTTCATGCACTGGATGCTTTATTTGACCAAACAATTGCGGAGAATTTGACAGAGAACATGGAAGGTGACCACTCCGAAAACAAAAGCTTCGTCAACGTCCTACTCCAACTTCAACAGAGTAACAACCTTAACTTCGAACTCACCAAAAATGACGTCAAAACACTTCTCTTGGATATGTTCGCTGGAGGAACCGACACAACTGCAGTAACAGCAGAATGGGCTATGTCAGAGCTTATGAGAAACCCAGCCATAATGAAGAAAGCGCAGGAAGAAGTGAGAAAAATCGTGGGACATAAATCGAAGATAGAAGAAAGTGACATGAGCCAAATGCATTACCTGAAATGTATTATCAAAGAAACTCTAAGGTTGCATCCAGCTGCTCCACTTTTGGCTCCAAGGACAACAATATCCAGTGTGAAATTGAGAGGATACGACATTCCAGCAAAAACATTGGTATATGTTAATGCATGGGCAATTCATAGAGATCCTAATTTCTGGGAAAGTCCCGAAGAATTCACACCAGAGAGATTTGAAAACAGCCAAATTGATTATAAGAGTCAACATTTTCACTATATTCCATTTGGTTTCGGGAGAAGAGGGTGTCCTGGAATCTATTTTGGACTTGCTTTGGTTGAGTATTTTCTGGCCAACCTTCTTTGTTGGTTTGATTGGAAGTTACCTGAGTCGGATGAACATAAAGATATAGATATGAGTGAGAAGTTCGGACTTGTTGTCTCAAGGAAAATACCCCTCTATCTTAACCCAGTAACTTTTCCTTCTAAGTTCTAA 1635 0.4196 NEKALINKKQVVLDCGYKCLRGLVTVSRVYDEMKEMMICNFYLSLLFFISVLCVLKFATKTKTKPKTKLNLPPSPPKLPFIGNLHQFGTLPHRSLRNLSLNHGGIMLLQLGQMENPTLVVSSAEAVTEIMKTHDLAFSDRPQNIAAKILLYGCTNIAFSLYGQNWRHKRKISVLQLLNMKRVQSLHQIREEEVANLVNKLRDVSSSDDECYVNLSEMLMSTSSDVACKCALGRKYSGDGHSRVKELANDVMHQLVAFTVGDYFPLLGWVDFLTGKIQEYKATFHALDALFDQTIAENLTENMEGDHSENKSFVNVLLQLQQSNNLNFELTKNDVKTLLLDMFAGGTDTTAVTAEWAMSELMRNPAIMKKAQEEVRKIVGHKSKIEESDMSQMHYLKCIIKETLRLHPAAPLLAPRTTISSVKLRGYDIPAKTLVYVNAWAIHRDPNFWESPEEFTPERFENSQIDYKSQHFHYIPFGFGRRGCPGIYFGLALVEYFLANLLCWFDWKLPESDEHKDIDMSEKFGLVVSRKIPLYLNPVTFPSKF 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04358 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Viun3g04358 544 SUPERFAMILY Cytochrome P450 72 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 CDD CYP71-like 102 533 - -
Viun3g04358 544 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 PRINTS E-class P450 group I signature 437 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 Gene3D Cytochrome P450 56 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 Pfam Cytochrome P450 72 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04358 544 PANTHER CYTOCHROME P450 71B11-RELATED 52 538 - -
Viun3g04358 544 FunFam Cytochrome P450 83B1 58 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04358 Viun-Chr3 51357218 51359253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04358 46 538 Cytochrome P450 AT3G26170 42.231 1.19e-137 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04358 K20617 - gmx:100803384 716.457