Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04357 ATGTGGCAAAAAAAGGAAATGGCTCTTAACCTCTGTCTCTCTCTGTCCTTTCTCATCAGTGTTCTCTTTCTGTTTAAGCTGGCAAGAAGGTCCAAATCCAAACCCAAAACGAATCTGAATCTGCCTCCATTTCCCCCAAAGCTACCGTTCATAGGAAATCTGCATCAGTTTGGCACACTGCCACATCGAGCTCTTCGAGATCTCTCTCTCAAATACGGTGATATAATGATGTTGCAGTTGGGACAGATGCAAACTCCAACCCTTGTGGTTTCGTCTGCAGATGTGGCCATGGAAATAACGAAAAGTCACGACCTAGCCTTTTCGGACCGACCCCAAAACACTGCTGCAAATATCCTATTCTATGGATGCACAGACTTTGCCTTTGAACTCTATGGAGAAAACTGGAGACAGAAAAGAAAAATATCCGTGGTTGAATTTCTGAGCTCGAAAAGGGTGCAATCATTTAAAGCTATCAGGGAAGAAGAAGTTGCGCAGTTGGTGAAGAAGCTACGTGAAGCTAGCAGGAGCGATGAAAAGGTTGTGAATCTAAGTGAGATGATTGTGTCAACATCGAATAATATTGCGTGTAAATGTGCTCTTGGGAGGAAGTTTGCAGGAGATGGTTACAGCAGAGTGAAAGAGTTAGCAAGGGAAGTTATGATTCATCTCACAGCTTTTACTGTCAGAGATTACTTCCCTTGGCTGGGTTGGGTTGATGTTGTTACTGGAAAAATTCAGAAATACAAGGCCACTGCTGAAGCATTGGATGGTTTATTTGATGAGGTAATTGCAGAAAATTTGAGAGAGAAAAGGGAAGGTCAACAACACTTCAAAAACAAAGTCTTCTTGGACGTCCTCCTCCAACTTCAAGAAGATAACACGCACAGCTTCCACCTCACCAAAAAGGACATCAAGGCAATTTTAACGGACATGTTTGTGGGAGGCACCGACACAACTTCATCGGCGATACAATGGACTATGTCTGAGCTTGTAAGAAATCCAAACGTAATGAAAAAAGTACAAGAAGAAGTGAGAAAAGTTGTAGGTCATAAATTGAATGTAGAAGAAAGTGATATTAAGAAAATGAATTACTTAAAGTGCGTGATCAAAGAATCTCTGAGAATACACCCTCCAACTCCTCTTCTGGCTCCTCGAGTAACAGTCTCTGCTGTAAAACTGAAAGGATATGATATTCCGGCAAAAACAACGGTTTATATAAATTCCTGGGCAATGCAAAGAGATCCTAAATTCTGGGAAAGTCCTGAAGAGTTCATGCCAGAGAGATTTGAAAATATCGAAGTTGATTTTAAAGGTCAAGAAGACTTTCAGTTTCTTCCGTTTGGTTTTGGGAGAAGAGGATGTCCTGGAATTCACTTTGCCAATGCTTCTATGGAGTATATGCTTGCAAATCTTCTTTATTGGTTTGATTGGAAGTTGCCACAAAATCAAACACAAGACATAGATATGACCGAAATGTTTGGACTTGTTGTCTCAAAGAAAGTACCACTTCATGTTATACCAACAACCTTTTCATTTTAA 1539 0.4061 MWQKKEMALNLCLSLSFLISVLFLFKLARRSKSKPKTNLNLPPFPPKLPFIGNLHQFGTLPHRALRDLSLKYGDIMMLQLGQMQTPTLVVSSADVAMEITKSHDLAFSDRPQNTAANILFYGCTDFAFELYGENWRQKRKISVVEFLSSKRVQSFKAIREEEVAQLVKKLREASRSDEKVVNLSEMIVSTSNNIACKCALGRKFAGDGYSRVKELAREVMIHLTAFTVRDYFPWLGWVDVVTGKIQKYKATAEALDGLFDEVIAENLREKREGQQHFKNKVFLDVLLQLQEDNTHSFHLTKKDIKAILTDMFVGGTDTTSSAIQWTMSELVRNPNVMKKVQEEVRKVVGHKLNVEESDIKKMNYLKCVIKESLRIHPPTPLLAPRVTVSAVKLKGYDIPAKTTVYINSWAMQRDPKFWESPEEFMPERFENIEVDFKGQEDFQFLPFGFGRRGCPGIHFANASMEYMLANLLYWFDWKLPQNQTQDIDMTEMFGLVVSKKVPLHVIPTTFSF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04357 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Viun3g04357 512 SUPERFAMILY Cytochrome P450 39 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 FunFam Cytochrome P450 83B1 28 506 - -
Viun3g04357 512 Pfam Cytochrome P450 42 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 PANTHER CYTOCHROME P450 71B11-RELATED 23 508 - -
Viun3g04357 512 Gene3D Cytochrome P450 31 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 CDD CYP71-like 71 503 - -
Viun3g04357 512 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04357 512 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04357 Viun-Chr3 51330258 51333798 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04357 32 508 Cytochrome P450 AT3G48270 41.962 7.14e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04357 K20617 - gmx:100803922 756.518