Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04355 ATGGCTCTCAAACAATGGCCTTTGGAGCTAATGGAGGGAGTGTTCTCTTCTACCTTCTATCTTTCTCTTTCCTTTTTCGTCAGTGTTCTGTTATTCTTTAAGCTCGCAAGAAGATCCAAACCCAAAACCATTCTGAATCTGCCACCATCTCCCCCAAAGCTGCCATTCATAGGCAATCTGCATCAGTTTGGCACACTGCCACATCGAGCTCTTCGAGATCTCTCTCTCAAATACGGTGATATAATGATGTTGCAGTTGGGACAGATGCAAACTCCAACCCTCGTGGTTTCATCTGTAGATTTGGTGACGGAAATAATCAAAACACATGACCTAGCCTTTTCGGACCGACCCCAAAACACTTCATGTAAAATCTTACTCTATGGATGCACAGACGTTGGGTTCTCACTCTATGGAGAAAACTGGAGACTGAAAAAAAAAATGTGTGTGCTTGAACTTCTGAGCGCCAAAAGGGTGGAATCATTTCGGGTCATCAGAGAAGAAGAAGCTGGAGAGTTGGTGAAAAAGCTACGTGAAGCAAGCTCGAATGATGCAAGTTACGTGAATCTAAGTGAGATGTTCATGGCAACATCAAATAATATCGTGTGTAAATGTGCTTTTGGAAGGAAGTTTGCAGGAGATGGTTACAGCAGAGTGAAAGAGTTAGCAAGGGAAGTGATGATTCATATAACAGCTTTCACTGTGAGAGATTACTTCCCTTGGCTGGGTTGGGTTGATGTTGTTACTGGAAAAATTCAGAAATACAAGGCCACTGCTGCAGCATTGGATGCTTTATTTGAAGAGTTAATTGCAGAACGTTTGAGGCAGAGAAGCGAAGGTGAACACTCCAAAATGAAAGACTTATTGGATATTCTCCTCCAACATCACCAGGATAACACGCTGGGATATGAGTTTACCAAAAATGACATCAAATCACTTATTACGGACATGTTTCTGGGAGGTACCGACACAACTGCGATCATATTGGACTGGACCATATCAGAACTTATGAGAAACCCAACCACAATGAAAAAAGTGCAAGAAGAAGTGAAGAGAATTGTAGGTCATAAATCAAAGGTGGAAGAGAATGATGTGAATGAGATGCGATATCTAAAATGTGTAGTGAAAGAAACTATAAGGTTACACCCTCCAGCTCCTCTTTTGGCTCCTCGAGTAACAATGTCTGATGTAAAACTAAATGGATACGACATTCCTGCAAAAACAATGGTATATATCAATGCATGGGCAATGCAAATGGATCCTAAACTCTGGGAACGTCCTGAACAATTTCTGCCAGAGAGATTTGAAAACAGTGAAGTTGATTTCAAAAACCAAGAAAACTTTCACTTTATTCCATTTGGTTTTGGAAGAAGAGGATGTCCTGGAATGAGTTTTGGAATTAGTTCAGTTGAGTATTTGCTTGCTAATCTTCTTTATTGGTTCGATTGGACGTTGCCTGAAACTGCTACTGCTACACCCAATATAGACATGAGCGAGAAATTTGGACTTGTTGTCTCAAAGAAAGTTCCACTTCTCCTTAAGCCAAAAGTCTTTTCATCTTAA 1560 0.4071 MALKQWPLELMEGVFSSTFYLSLSFFVSVLLFFKLARRSKPKTILNLPPSPPKLPFIGNLHQFGTLPHRALRDLSLKYGDIMMLQLGQMQTPTLVVSSVDLVTEIIKTHDLAFSDRPQNTSCKILLYGCTDVGFSLYGENWRLKKKMCVLELLSAKRVESFRVIREEEAGELVKKLREASSNDASYVNLSEMFMATSNNIVCKCAFGRKFAGDGYSRVKELAREVMIHITAFTVRDYFPWLGWVDVVTGKIQKYKATAAALDALFEELIAERLRQRSEGEHSKMKDLLDILLQHHQDNTLGYEFTKNDIKSLITDMFLGGTDTTAIILDWTISELMRNPTTMKKVQEEVKRIVGHKSKVEENDVNEMRYLKCVVKETIRLHPPAPLLAPRVTMSDVKLNGYDIPAKTMVYINAWAMQMDPKLWERPEQFLPERFENSEVDFKNQENFHFIPFGFGRRGCPGMSFGISSVEYLLANLLYWFDWTLPETATATPNIDMSEKFGLVVSKKVPLLLKPKVFSS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04355 519 Pfam Cytochrome P450 48 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 Gene3D Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 CDD CYP71-like 77 510 - -
Viun3g04355 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Viun3g04355 519 Coils Coil 251 271 - -
Viun3g04355 519 FunFam Cytochrome P450 83B1 34 513 - -
Viun3g04355 519 PANTHER CYTOCHROME P450 71B11-RELATED 33 514 - -
Viun3g04355 519 SUPERFAMILY Cytochrome P450 48 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04355 519 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04355 Viun-Chr3 51311021 51313232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04355 48 517 Cytochrome P450 AT3G26330 43.368 3.28e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04355 K20617 - gmx:100803922 788.875