Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04354 ATGGCTCTCAAACAATGGCCTTTTGAGCAAATGGAAGGAGTATTCTCTTCTACCTTCTATCTTTCTCTTTCCTTTTTCATCAGTATTCTGTTATTCTTTAAGCTCGCAAGAAGATCCAAACCCAAAACCATTCTGAATCTGCCACCATCTCCCCCAAAGCTGCCATTCATAGGCAATCTGCATCAGTTTGGCGCACTGCCACATCGAGCTCTTCGAGATCTGTGTCTGAAATATGGAGATATAATGATGTTGCAGTTGGGACAGATGCAAACTCCAACCCTCGTGGTTTCATCTGTAGATTTGGTGACGGAAATAATCAAAACACATGACCTAGCCTTTTCAGACCGACCCCAAAATTCTTCATGTAAAATCTTACTCTATGGATGCACAGACGTTGGGTTCTCACTCTATGGAGAAAACTGGAGACTAAAAAGAAAAATATGTGTGCTTGAACTTTTGACCTCCAAAAGGGTGCAATCATTTCGGGTCATCAGAGAAGAAGAAGCTGGGGAGTTGGTGAAAAAGCTACGTGAAGCAAGCTCGAATGATGCAAGTTACGTGAATCTAAGTGAGTTGATTATGGCAACATCAAATAATATCGTGTGCAAATGTGCTCTTGGAAGGAGGTTTGCAGGAGATGGTTACAGCAGAGTGAAAGAGTTGGCGAGGGAAGCCATGATTCATATTACAGGTTTCACAGTGAGAGATTACTTCCCTTGGTTGGGTTGGGTTGATGTTGTTACTGGAAAAATTCAGAAATACAAGGCCACTGCTGCAGCAATGGATGCTGTATTTGAGGAAGCAATTGCAGAACGTTTGAGGGTGAGAAGAGAAGGTGAACACTCCAAAATGAAAGATTTCTTGGATATTCTCCTCGATCATCACCAGGATAACACGCTGGGATACCAGTTCACCAAAAATGACATCAAATCACTAATAACGGACATGTTTCTGGGAGGTACCGACACAACTGCAGCCGCATTAGAATGGTGTATGTCAGAACTTATGAGGAATCCAACCGTAATGCAACGAGTGCAAGAAGAAGTGAGGAGAGTTGTAGGTCATAAGTCAAAGGTGGAAGAGAATGATGTGAATGAAATGCGATATCTAAAATGTGTAGTGAAAGAAACTATAAGGTTGCATCCTCCAACTCCTCTTTTGGCTCCTCGAGTAACAATGTCTGATGTAAAACTAAATGGATACGACATTCCTGCGAAAACAACGGTATATATCAATGCATGGGCAATGCAAATGGATCCTAAACTCTGGGATCGTCCTGAACAGTTTCTGCCAGAGAGATCTGAAAACAGTGAAGTTGATTTCAAAAACCAAGAAAACTTTCACTTTATTCCATTTGGTTTTGGAAGAAGAGGATGTCCTGGAATGGGTTTTGCAATTAGTTCAATTGAGTATTTGCTTGCTAATCTTCTTTATTGGTTCGACTGGAAGTTGCCTGAAACTGCTGCTGCTACATTGGATATAGACATGAGCGAGGTATTTGGACTTGTTGTCTCAAAGAAACTACCACTTCTCCTTAAACCAAAAACCTTTTCATCTTAA 1560 0.4122 MALKQWPFEQMEGVFSSTFYLSLSFFISILLFFKLARRSKPKTILNLPPSPPKLPFIGNLHQFGALPHRALRDLCLKYGDIMMLQLGQMQTPTLVVSSVDLVTEIIKTHDLAFSDRPQNSSCKILLYGCTDVGFSLYGENWRLKRKICVLELLTSKRVQSFRVIREEEAGELVKKLREASSNDASYVNLSELIMATSNNIVCKCALGRRFAGDGYSRVKELAREAMIHITGFTVRDYFPWLGWVDVVTGKIQKYKATAAAMDAVFEEAIAERLRVRREGEHSKMKDFLDILLDHHQDNTLGYQFTKNDIKSLITDMFLGGTDTTAAALEWCMSELMRNPTVMQRVQEEVRRVVGHKSKVEENDVNEMRYLKCVVKETIRLHPPTPLLAPRVTMSDVKLNGYDIPAKTTVYINAWAMQMDPKLWDRPEQFLPERSENSEVDFKNQENFHFIPFGFGRRGCPGMGFAISSIEYLLANLLYWFDWKLPETAAATLDIDMSEVFGLVVSKKLPLLLKPKTFSS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04354 519 Gene3D Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 CDD CYP71-like 77 505 - -
Viun3g04354 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Viun3g04354 519 SUPERFAMILY Cytochrome P450 48 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 PANTHER CYTOCHROME P450 71B11-RELATED 33 514 - -
Viun3g04354 519 FunFam Cytochrome P450 83B1 34 513 - -
Viun3g04354 519 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04354 519 Pfam Cytochrome P450 48 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04354 Viun-Chr3 51304802 51307963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04354 48 517 Cytochrome P450 AT3G26330 42.316 1.41e-131 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04354 K20617 - gmx:100803922 780.4