Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04352 ATGACAAAGGAGGCAATCGTCATGCATGATTTGCGGATGATTCATACTGACCTGAAACCTGAAAACATATTACTAGTTTCGCCGGAATATGTCAAAGTGCCCGACTACAAGAGTTCGTCTAGATCACCAAGTACCTATTTCAAGAGAGTTCCCAAATCTAGCGCCATAAAGGTTATTGATTTTGGAAGCACCACTTACGAGCGAGATGATCAGACTTACATTGTATCAACTCGTCATTATAGAGCGCCTGAAGTTATCCTTGGACTTGGCTGGAGCTATCCATGTGATATATGGAGTGTAGGATGTATATTGGTGGAGTTATGCACGGGCGAAGCATTATTTCAGACTCATGAAAATTTAGAACATCTTGCTATGATGGAAAGGGTACTTGGTCCTTTACCACAGCACATGTTGAAGAGAGTCGATCGAAATGCTGAGAAGTATGTTAGGAGGGGTAGATTAGACTGGCCTGAGGGTGCAACCTCGAGGGAGAGTATCAAAGCTGTAATGAAGCTTCCTAGGTTACAGAACCTTATAATGCAGCATGTAGATCATTCAGCAGGCGATCTCATACATCTGTTACAGGGATTACTTAGATTTGATCCCTCTGAAAGACTTACAGCCAAGGAAGCCCTTAGATATCCCTTCTTTATGAGAGATCACTTTAGGAGATAA 675 0.4222 MTKEAIVMHDLRMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSTYFKRVPKSSAIKVIDFGSTTYERDDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRNAEKYVRRGRLDWPEGATSRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRFDPSERLTAKEALRYPFFMRDHFRR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04352 224 SMART serkin_6 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04352 224 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04352 224 Gene3D Transferase(Phosphotransferase) domain 1 7 217 - -
Viun3g04352 224 SUPERFAMILY Protein kinase-like (PK-like) 8 221 IPR011009 -
Viun3g04352 224 FunFam Serine/threonine-protein kinase AFC2 2 217 - -
Viun3g04352 224 ProSitePatterns Serine/Threonine protein kinases active-site signature. 13 25 IPR008271 GO:0004672|GO:0006468
Viun3g04352 224 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 8 220 - -
Viun3g04352 224 Pfam Protein kinase domain 8 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04352 Viun-Chr3 51292829 51296695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04352 8 221 MAP Kinase Gene Family AT4G11330 30.415 1.53e-20 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Viun3g04352 Pkinase 5.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04352 K08287 - gmx:100804452 423.32