Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04333 ATGGCTCCCAAAACCGTATCCATTGACTACCAAACCACCCGGGTCTTACCCGAACCCGATGTCTTCATACACTGTTTCCAAGGAACACGTATTCCAGCTCACGCTGCCGTTCTGGCTTCGGTGTCGCCAGTTTTGGAGAACTTCATAGATCGGCCACGTAAGCATCGGAGTTCCGAGAAAATTATCCAAATCCACGGCGTCCCTTGCGACGCCGTCATCGCCTTCGTCGGATTCCTCTACTCCTCCAGGTGCACGGAGGAGGCGATGGACAAGTACGGGATGCACCTGCTCGCATTGTCGCACGTGTACCTGGTGCCGCAGCTAAAACAGAGATGCATCAAGGGTTTGGCCCAGCGCTTGACCACAGAGAACGTGGTGGACGTGCTGCAACTCGCGCGCCTCTGCGACGCGCCGGATCTCCACCTCCGATGCATGAAGCTCCTCACCTATAACTTCAAAGCGGTGGAGGCAACCGAGGGGTGGAAGTTCCTCGTCAAACACGATCCCTGGCTCGAACTCGACATTCTCCGCTTCATCGACGAACACGAAACGAGGAAGAAGAAATCGAGAAGGTATAGGATGGAGCAGAGTCTGTACGGGGAACTGAGCGAGGCGATGGAGTGTCTGGAACACATATGCTCGGAGGGGTGCACTCATGTTGGACCCTACGATGCGGAGGTGAAGAAAGAGAGGAGGCCATGTGGCAGATTCTCCACGTGTGAAGGGCTTCAGGTTCTGATCCGCCACTTTGCCACGTGCGAGAAGAGAATGGGCGGTGGTTGCGTCCGCTGCAAACGGATGTGGCAACTCTTTCGACTTCATTCATACGTTTGCCACCAAACCGACTCTTCCTGCAAGGTTCCTTTCTGCAGGCAATTTCAGTTGAAGATGCAGGAAGAGAAAAGAAAGGATGATGCTAAGTGGAAACTTCTAGCGAGGAAGGTGGCCTCAGCCAAAGTAATGTCTTCCCTGTCTCTTCCAAAGAGGAAACGAGACGAGGAGATTAGAGGCACAATAAACAATCCCGGGATTAGAAGCTTTAAATTACTCTGA 1053 0.5318 MAPKTVSIDYQTTRVLPEPDVFIHCFQGTRIPAHAAVLASVSPVLENFIDRPRKHRSSEKIIQIHGVPCDAVIAFVGFLYSSRCTEEAMDKYGMHLLALSHVYLVPQLKQRCIKGLAQRLTTENVVDVLQLARLCDAPDLHLRCMKLLTYNFKAVEATEGWKFLVKHDPWLELDILRFIDEHETRKKKSRRYRMEQSLYGELSEAMECLEHICSEGCTHVGPYDAEVKKERRPCGRFSTCEGLQVLIRHFATCEKRMGGGCVRCKRMWQLFRLHSYVCHQTDSSCKVPFCRQFQLKMQEEKRKDDAKWKLLARKVASAKVMSSLSLPKRKRDEEIRGTINNPGIRSFKLL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04333 350 FunFam BTB/POZ and TAZ domain-containing protein 2 121 191 - -
Viun3g04333 350 Pfam BTB/POZ domain 19 118 IPR000210 GO:0005515
Viun3g04333 350 Pfam TAZ zinc finger 203 290 IPR000197 -
Viun3g04333 350 SMART TAZ_2 196 291 IPR000197 -
Viun3g04333 350 SUPERFAMILY POZ domain 20 148 IPR011333 -
Viun3g04333 350 FunFam BTB/POZ and TAZ domain-containing protein 2 192 319 - -
Viun3g04333 350 Gene3D - 121 193 - -
Viun3g04333 350 SMART BTB_4 19 120 IPR000210 GO:0005515
Viun3g04333 350 Gene3D Potassium Channel Kv1.1; Chain A 17 120 IPR011333 -
Viun3g04333 350 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 17 332 IPR044513 -
Viun3g04333 350 SUPERFAMILY TAZ domain 195 298 IPR035898 -
Viun3g04333 350 ProSiteProfiles BTB domain profile. 19 88 IPR000210 GO:0005515
Viun3g04333 350 Gene3D TAZ domain 194 319 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04333 Viun-Chr3 51153060 51156346 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Viun3g04333 BTB 5.8e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04333 - - gmx:100807120 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04333 3 51153060 51156346 Viun3g04333 3 51153060 51156346 ECH
Viun3g04333 3 51153060 51156346 Viun9g01399 9 14785323 14788913 PCT