Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04318 ATGGCCCCTCCTCAGTTTAGTGCCTTAAACGGAGAAATCGATGGTGAAAATCTATCGTACGTGTTTGATATATGGGCAACCGATGAATATAGCTGTTTTCCTCTTGAACCAATCTCGGAGAGTAACAGTTGCAGCTTAGTTCTCCCCTATTGTGACGGAAGCATAAGGGATAACAAAAGGGTGAAGAGAACGGTGGGAATTCCCGTTGATTGGTTAGGAAATTTGATGAGCAATTCCCATTGTTTCCTGAACACCAACGCCAGCAATTGCAATAGGAGTAGAGATAGCATACCAAAGCTTCACTTCAGAGATCACATACGGACTTACAAACAAAGGTATCTGGCAGCGGAAGCAGAAGAAGAGGCACCAGAAGATACAAATAGTTCAGAAAGTGGTGGGGCTGAAGAAGACGGTTGTCATGACGGTGTGAGGCTGGTTCAACTTCTAATAGCATGTGCAGAAGCGGTGGCTTGTCGAGACAAATCGCACGCTTCGATATTACTATCAGAACTGAAAGCCAACGCTTTAGTATTCGGATCTTCGTTCCAAAGGGTTGCCTCTTGTTTTGTTCAAGGCCTAACGGAGAGGCTGAATCTGATTCAGCCCACCGGGCCGGTGAGCCCGATGCCACCCATGATGAACATTATGGACACAGCCTCCGAGGAAATGGAGGAAGCATTCAGATTGGTTTACGAGCTGTGTCCACAAATCCAGTTCGGACACTTTGTCACTAATTCTATAGTGATGGAAGCCTTTTCGGGTGAGAGTTTTGTCCATGTCGTGGATTTCGGGATGACTCTCGGATTACGGCACGGACACCAATGGAGAGAACTCATGCGGAGCCTCGCCAATGGCGGCAGCGAACGTCTTCGTCGTCTGCGAATCACGGCGGTGGGACTCTGCGATAGACTTCAATCCATCGGCGACGAACTCTCGGTTTATGCGACTAATTTGGGTATCAACTTTGAATTCTCAGTGGTGAAAAAGAATTTGGAAAGTTTGAAAGCGGAGGACATAGAAGTGAGGGAGGAAGAGGTTCTTGCGGTGAACAGCATTCTGCAGCTGCACTGCGTGGTGAAGGAAAGCCGAGGGGCTTTGAATTCGGTGCTGCAGATGGTTCACGGGCTTGGGCCGAAAGTGTTGGTGATGGTGGAGCAGGATTCGAGTCACAACGGACCCTTTTTCCTCGGGAGATTCATGGAATCATTGCACTATTATTCTGCCATATTCGATTCCTTGGATGTTATGCTGCCCAAGTATGACACGAAGAGAGCGAAGATGGAGCAGTTTTACTTCGCTGAGGAGATAAAGAACATAGTGAGCCGTGAGGGGCCGTTGAGGATGGAGAGACACGAGAGAGTGGATCAGTGGCGGAGGAGGATGAGCAGGGCGGGGTTTCAGGCTGCGCCGATCAAGATGGTGGCTCAGGCGAAGCAGTGGCTTCTGAATGGGAAGGTGTGTGAGGGGTACACGGTGGTGGAAGAGAAAGGGTGTCTGGTTCTTGGATGGAAATCCAAGCCTATTGTGGCGGTTTCTTGCTGGAAATGCTGA 1551 0.4919 MAPPQFSALNGEIDGENLSYVFDIWATDEYSCFPLEPISESNSCSLVLPYCDGSIRDNKRVKRTVGIPVDWLGNLMSNSHCFLNTNASNCNRSRDSIPKLHFRDHIRTYKQRYLAAEAEEEAPEDTNSSESGGAEEDGCHDGVRLVQLLIACAEAVACRDKSHASILLSELKANALVFGSSFQRVASCFVQGLTERLNLIQPTGPVSPMPPMMNIMDTASEEMEEAFRLVYELCPQIQFGHFVTNSIVMEAFSGESFVHVVDFGMTLGLRHGHQWRELMRSLANGGSERLRRLRITAVGLCDRLQSIGDELSVYATNLGINFEFSVVKKNLESLKAEDIEVREEEVLAVNSILQLHCVVKESRGALNSVLQMVHGLGPKVLVMVEQDSSHNGPFFLGRFMESLHYYSAIFDSLDVMLPKYDTKRAKMEQFYFAEEIKNIVSREGPLRMERHERVDQWRRRMSRAGFQAAPIKMVAQAKQWLLNGKVCEGYTVVEEKGCLVLGWKSKPIVAVSCWKC 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04318 516 MobiDBLite consensus disorder prediction 117 136 - -
Viun3g04318 516 Pfam GRAS domain family 145 515 IPR005202 -
Viun3g04318 516 ProSiteProfiles GRAS family profile. 136 515 IPR005202 -
Viun3g04318 516 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 121 510 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04318 Viun-Chr3 50991304 50993396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04318 137 515 GRAS Transcription Factor Family AT1G14920 38.107 7.02e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun3g04318 GRAS 5.1e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04318 - - gmx:100813548 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04318 3 50991304 50993396 Viun3g04318 3 50991304 50993396 ECH