Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04311 ATGGCGGCAGGGCGAAAAAGTGTTCCGCTGAAAGGTGACTTTTTCAAATACAGTTCCACGAAGGGGTCTGATCACTATAAGAATGGCTCTTTCGGCGTTGAAGTCGGTGGATCTCGCAGCCATCACTTTGCTCGTTCCGATGAGCCTCGTGGTCGGAAAGAGGAGAGAGAGCAAGGTGAGATCTGTGTTGAAGATGACGAATATGAGGTTGCCTATGGTTTGCCACCGCCACAGAAGAAAAGGAAGTTTTCTCCAATCGTATGGGACCTAGCAGAGAAGGAAGAAAGAATTTCGTCCGAGAGTAGGATCTCGGAGACTGTTGCTCTGTCTCCTCTTCCCTCTGTACTGAGCAGTCCTGGAGCCAACCTTGTTGATTCAGATGATCTTATGGCGGAATCTTTGCGAGATTCTCGAAGCTATGGACAAGATGTGGAGGAAGAGAAGGATGTTCAAGAATGGACTATCAGAAAGTCAAGATGGGCTAGTGATGATGGTCCCTCACCCAGGGCTGCTGATGATAAATTCAATCATGGCAAAGGCAGCTCCAGTCCTGAAATTGGTGAATTCCATCGCAGTGAATCTTCAGAAAGCACTGTCACTAGATCGTCAGGAAGCACGGGAAGAGATCATTATCTTGGACTTTCTACTGATGACGCCGATTCTGAAAGGGATTTCCACATAGATCCCATGGACGATGTTGAGGAACCAAGTGACGTTGGTGATTGTCCATCGGATTCTGAAGAGAGTGATGGATTGATGCAAGTGCACAGAAATATAAATATGCTTCACAGTTGCAGAAGTGTGTGCGAGTTTGAGATGATTAAGAAAATAAATGAAGGAACTTATGGTGTTGTCTATAAAGCTAGGGATAAGAAAACTGGAGAATTAGTCGCATTGAAGAAGGTGAAGATGAATATAGAGAGGGATGGCTTTCCGATGTCATCCTTGAGGGAAATAAACATTCTCTTGTCTTTTAACCACCCTTCCATTGTGAATGTTAAAGAAGTAGTTGTAGATGACTTTGACGGTACTTTTATGGTAATGGAATTCATGGAGCATGACCTCAAGGGAATGATGGAGGTTAAGAAACAGCCTTTTACCATTAGCGAAATTAAATCCTTGGTAAAGCAACTTCTTGAAGGTGTCAAGTATCTCCATGATAACTGGGTTATCCATAGGGACTTGAAGTCATCAAACATTCTGCTGAACCATGACGGGGAGCTTAAAATATGCGATTTTGGGTTGTCAAGGCAGTATGGAAGCCCTCTGAAGCCATATACTCCTGTTGTGGTGACACTATGGTACAGGGCACCTGAACTTTTGTTGGGTGCTAAAGAATATTCAACAGCAATTGACATGTGGTCAGTGGGTTGCATAATGGCTGAATTATTTTCCAAGGAGCCTCTATTCAGGGGTAAAAGTGAACTTGAACAACTTGATCAGATTTTTCGAACCCTGGGTACGCCTGATGAGAAAATTTGGCCTGGTTTATCCAAATTACCTGGGGCTAAAGCAAAATTTGCCAAGCAACCGTTTAATAGGTTAAGGAAGAAGTTTCCAGCTGCATCATTTACCGGTTTGCCAGTTTTATCTGAGCTAGGATTTGACTTGTTGAAGAAGCTTTTAACTTATGACCCGGAAGAGAGGATAACTGCTGAAGATGCTCTCCTTCATGATTGGTTCTATGAAGGCCCTCCTCCCAAATCTGATTTCAATCCTATTTTTCCTTCCTGGAGGTGCTAG 1743 0.436 MAAGRKSVPLKGDFFKYSSTKGSDHYKNGSFGVEVGGSRSHHFARSDEPRGRKEEREQGEICVEDDEYEVAYGLPPPQKKRKFSPIVWDLAEKEERISSESRISETVALSPLPSVLSSPGANLVDSDDLMAESLRDSRSYGQDVEEEKDVQEWTIRKSRWASDDGPSPRAADDKFNHGKGSSSPEIGEFHRSESSESTVTRSSGSTGRDHYLGLSTDDADSERDFHIDPMDDVEEPSDVGDCPSDSEESDGLMQVHRNINMLHSCRSVCEFEMIKKINEGTYGVVYKARDKKTGELVALKKVKMNIERDGFPMSSLREINILLSFNHPSIVNVKEVVVDDFDGTFMVMEFMEHDLKGMMEVKKQPFTISEIKSLVKQLLEGVKYLHDNWVIHRDLKSSNILLNHDGELKICDFGLSRQYGSPLKPYTPVVVTLWYRAPELLLGAKEYSTAIDMWSVGCIMAELFSKEPLFRGKSELEQLDQIFRTLGTPDEKIWPGLSKLPGAKAKFAKQPFNRLRKKFPAASFTGLPVLSELGFDLLKKLLTYDPEERITAEDALLHDWFYEGPPPKSDFNPIFPSWRC 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04311 580 MobiDBLite consensus disorder prediction 95 249 - -
Viun3g04311 580 ProSiteProfiles Protein kinase domain profile. 271 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04311 580 MobiDBLite consensus disorder prediction 40 59 - -
Viun3g04311 580 SUPERFAMILY Protein kinase-like (PK-like) 265 566 IPR011009 -
Viun3g04311 580 FunFam cyclin-dependent kinase G-2 isoform X1 256 352 - -
Viun3g04311 580 Gene3D Transferase(Phosphotransferase) domain 1 353 572 - -
Viun3g04311 580 SMART serkin_6 271 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04311 580 MobiDBLite consensus disorder prediction 26 59 - -
Viun3g04311 580 Pfam Protein kinase domain 271 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04311 580 MobiDBLite consensus disorder prediction 102 121 - -
Viun3g04311 580 MobiDBLite consensus disorder prediction 129 195 - -
Viun3g04311 580 PANTHER CELL DIVISION PROTEIN KINASE 270 562 - -
Viun3g04311 580 CDD STKc_CDC2L1 265 561 IPR045267 GO:0004674|GO:0005524|GO:0006468
Viun3g04311 580 FunFam Cyclin-dependent kinase G-2 353 580 - -
Viun3g04311 580 MobiDBLite consensus disorder prediction 213 233 - -
Viun3g04311 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672|GO:0006468
Viun3g04311 580 Gene3D Phosphorylase Kinase; domain 1 254 352 - -
Viun3g04311 580 MobiDBLite consensus disorder prediction 196 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04311 Viun-Chr3 50889622 50894249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04311 266 567 Core Cell Cycle Gene Families AT5G10270 45.283 1.65e-87 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Viun3g04311 Pkinase 1.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04311 K08818 - gmx:100788840 910.983