Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04289 ATGGCCACCACCACCACAAGTCTTGGCGGCGGCGCCGGCGGAGATGACCGCGTCCTAGCCACGGCTCAGCAGATCGTGAAGAGTCTCAGAGCCGCCAAAGAGGATCGCGAAGACATGCTTCTGATCTTTTCCACCTTCGATAACCGACTCTCCGGCATCTCCGACCTAATAAACGGCGACGATTCCAAATCCTCCGAAGAGGAGGAACTCGACCGCTTCGAAGCCGCGGAGAAAGTGATTCTCGCTGACGCATCTCTCTCCGAGGAGCCTTCTCGTCAATCCACTTCTCTCTTCAACCCTCCGAACAATCCCGCGGAGTACTTTTCCGCGGTTGACGAGATCATCCACTGGATGGAGCAGTTTTCGATCGCGCCACCGTCCTCCGCCGTCGGACGCACAGGGCCCGCCATCGTGGACCGGGCGGAGAACGCGATTCAGCTTGCGATGTCGCGACTGGAGGACGAGATGCGGCACGTGCTGATTTGCAACACGATCCCGCTCGACGCCATGAGCCGCTACGGTTCGATCAGGAGGGTTTCGCTCTCGTTCGGTTCGCACGACAGCGCCATCGACGATACCCTAGAGAGCTTCGGTGAGGTCGGCTCGAGTCGCTTCCACGAGCGAGGCGCGAGCCTTGGCGACGATTTGTTCGTCGATTTGGTTCGTCCCGAAGCGGTTCAGGATCTCAGGGAAATTATCGATCGCATGGTTAGGTCTGGTTATGAAAGAGAGTGTCTTCAGGTTTATAGCAGTGTCCGTCGCGACGCTCTGGATGAGTGTTTAGTCATTCTGGGTGTTGAGCGGTTGAGTATTGAAGAGGTTCAGAGGGTTGAGTGGAGAAGTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTGAAGGTTGCTGTTGGGGTTTTGTTGAGTGGTGAGAAGAGGCTGTGTGATAGTTTGTTCGGGGATTTGGATGATTTGAAGGAGATTTGTTTCAATGAGACTGCTAAGGGGTGTGTTATGCAGTTGCTGAATTTTGGCGAGGCTATTTCGATTTGTAAGCGCTCGCCGGAAAAGCTGTTTCGGATTTTGGACATGTATGAGGCTCTGAGGGATGCCATGCCTGATTTGCAGGCCATGGTTTCGGATGAGTTTGTGATTGGTGAGGCCAATGGAGTGCTGAGTGGACTTGGTGAGGCTGCCAAAGGAACTTTTGCTGAGTTTGAGAATTGCATTAGGAATGAAACTTCCAAGAAGCCAGTCATAACTGGGGATGTTCACCCGCTGCCTCGATATGTCATGAATTACCTCAAGTTGCTTGTGGATTATGGTGACCCCATGGATTCGCTTTTGGAGATTAGCGAGGAGGATCTCCATCGGTTTAAAAATGATCTTGGTGGTGATGGTTCGCAGTTGGAGGCCATGACGCCCTTGGGGCAGCGGATTCTGTTGCTCATGTCCGAGCTTGAGTATAATCTTGAGGAGAAGTCGAGGCTTTATGAAGATAGTGCTATGCAGCAGGTGTTTTTGATGAACAATCTGTATTACCTAGTGCGGAAAGTGAAGGACTCGGATCTTGGGAAGGTCTTGGGGGATAATTGGATTCGGAAACGACGTGGTCAGATAAGGCAGTATGCTACAGGGTATCTCAGAGCCTCTTGGAGCAGGGCCTTGTCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAATAATGCGTCGAAGATGGCTTTGAAGGAGAGATTCAAAAGCTTCAATGCCTGCTTTGAAGAAATTTATAGGATCCAGACTGCTTGGAAGGTACCGGATGATCAGCTTCGAGAGGAGCTGCGGATATCTATATCGGAGAAGGTGATTCCTGCATATCGCTCTTTTGTGGGTAGGTTTAGGAGTCAGTTAGAGGGAAGGCATGCGGGGAAATACATCAAGTATACACCAGAGGATCTAGAGACCTATCTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGGAAAAGTACATAG 1992 0.509 MATTTTSLGGGAGGDDRVLATAQQIVKSLRAAKEDREDMLLIFSTFDNRLSGISDLINGDDSKSSEEEELDRFEAAEKVILADASLSEEPSRQSTSLFNPPNNPAEYFSAVDEIIHWMEQFSIAPPSSAVGRTGPAIVDRAENAIQLAMSRLEDEMRHVLICNTIPLDAMSRYGSIRRVSLSFGSHDSAIDDTLESFGEVGSSRFHERGASLGDDLFVDLVRPEAVQDLREIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQRVEWRSLDEKMKNWVQAVKVAVGVLLSGEKRLCDSLFGDLDDLKEICFNETAKGCVMQLLNFGEAISICKRSPEKLFRILDMYEALRDAMPDLQAMVSDEFVIGEANGVLSGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLPRYVMNYLKLLVDYGDPMDSLLEISEEDLHRFKNDLGGDGSQLEAMTPLGQRILLLMSELEYNLEEKSRLYEDSAMQQVFLMNNLYYLVRKVKDSDLGKVLGDNWIRKRRGQIRQYATGYLRASWSRALSCLKDEGIGGSSNNASKMALKERFKSFNACFEEIYRIQTAWKVPDDQLREELRISISEKVIPAYRSFVGRFRSQLEGRHAGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04289 663 Coils Coil 138 158 - -
Viun3g04289 663 Gene3D Exocyst complex component Exo70 90 655 - -
Viun3g04289 663 Pfam Exo70 exocyst complex subunit 287 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun3g04289 663 PANTHER EXOCYST COMPLEX PROTEIN EXO70 67 650 IPR004140 GO:0000145|GO:0006887
Viun3g04289 663 SUPERFAMILY Cullin repeat-like 101 649 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04289 Viun-Chr3 50629100 50631589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04289 16 662 EXO70 exocyst subunit family AT5G50380 60.177 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04289 K07195 - gmx:100818693 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04289 3 50629100 50631589 Viun3g04289 3 50629100 50631589 ECH
Viun9g01580 9 23054910 23059924 Viun3g04289 3 50629100 50631589 PCT