Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04288 ATGAAGATGAGGGTAGAAGGGTTCCTTAACATGAGGAATCTGGTAGTTGTGGTGGCGTGGTTGGTGAACTTCAACATCGTTTTTTGTTTTGCTCATATTCATGGCTTCGGGGACCAACCACTCTCCAAGATTGCCATCAATAAAGCTGTTGTGTCTCTCCACTCTGCCGCTTCCATCACTGCCACACCGTCGCTTCTCGGTACAAAGGGTGAGGATACCCAATGGGTGAGAGTAGATATTGATTACCCTAACCCATCTGCAGATGATTGGGTTGGAGTTTTCTCTCCTGCGAAGCTCAATTCATCAACATGTCCACCTGTGAGTGATCCAAGAGAAGAGATTCCGTACATATGCTCGGCCCCAGTTAAGTTCCAGTTTTTGAATTACTCCAACTCACACTATACCAAGACAGGAAAAGGTTCTTTGAAGTTCCAGTTGATCAATCAACGTGCAGATTTCTCCTTTGCTCTATTTTCAGGAGGACTATTAAATCCTAAGCTTGTGGCAGTTTCCAATTTCATATCATTTGTCAATCCTAAGGTGCCTCTATATCCACGACTTGCTCAGGGGAAGTCTTGGGATGAAATGACAGTTACCTGGACTAGTGGATATCACATAAATGAAGCTATACCGTTTGTTGAGTGGGGTCCTAAGGGTAAAACACAAGTGCAATCTCCAGCCGGAACATTGACATTTGGTCGTAACAGCATGTGTGGTTCACCTGCACGAACTGTTGGGTGGCGTGACCCTGGTTTCATACATACAAGTTTTCTAAAAAGTCTTTGGCCAAACTTAGTGTATACCTATCGATTAGGGCATCTACTGTCTAATGGTGCTTACATCTGGAGCAAGCAATATTCATTTAAGTCATCACCTTATCCTGGACAGGACTCACTGCAACGTGTTATCATATTTGGTGACATGGGAAAGGCCGAGCGCGATGGTTCAAATGAGTATAATGCCTATCAACCTGGTTCGCTTAACACCACTGACCAGCTCATCAAGGATTTAGAAAATATTGACATTGTTTTCCACATAGGAGATATAACTTATGCAAATGGATACATCTCGCAGTGGGACCAATTCACTGCTCAAGTGGAACCAATTGCATCAAGAGTACCTTACATGATTGCCAGTGGTAATCACGAACGTGATTGGCCCAACACAGGATCCTTTTATAACAGTACAGATTCAGGCGGCGAGTGTGGAGTTTTGGCCCAGAACATGTATTTTGTTCCAGCAGAGAACAGAGCAAACTTTTGGTACGCGACGGATTATGGCATGTTTCACTTCTGCATAGCTGACAGTGAACATGATTGGAGAGAAGGAACAGAACAATACAAATTCATTGAACATTGCCTTGCAACAGTAGATAGACAGAAACAACCCTGGTTGATTTTTGTGGCTCATCGTGTGCTTGGATATTCTTCTGCTTCTGGGTATGCCAAGGACGGCTCATTTGAAGAGCCCATGGGAAGGGAAAGTTTACAGAGACTGTGGCAGAAATATAAAGTAGATATTGCATTTTATGGTCATGTACATAACTACGAAAGGACATGCCCCATATATCAGAATCAGTGTGTGAATGATGAAAGGTCTCATTATTCTGGTGTTGTGAATGGAACAATTCATGTTGTTACTGGAGGTGCAGGAAGCCACTTGTCAAAATTCAGTGAAGTAACCCCTAAGTGGAGTCTTTACAGAGACTATGATTTTGGGTTTGTAAAGTTGACAGCATTCAATCATTCATCTCTCCTCTTTGAATACAAGAAAAGCAGTGATGGAAAGGTCTACGATTCTTTCACCGTTTCAAGGGATTACAAAGATGTCTTAGCCTGTGTGCGTGATGGCTGCGAAGCAACCACTTCAGCAACTTGA 1878 0.4302 MKMRVEGFLNMRNLVVVVAWLVNFNIVFCFAHIHGFGDQPLSKIAINKAVVSLHSAASITATPSLLGTKGEDTQWVRVDIDYPNPSADDWVGVFSPAKLNSSTCPPVSDPREEIPYICSAPVKFQFLNYSNSHYTKTGKGSLKFQLINQRADFSFALFSGGLLNPKLVAVSNFISFVNPKVPLYPRLAQGKSWDEMTVTWTSGYHINEAIPFVEWGPKGKTQVQSPAGTLTFGRNSMCGSPARTVGWRDPGFIHTSFLKSLWPNLVYTYRLGHLLSNGAYIWSKQYSFKSSPYPGQDSLQRVIIFGDMGKAERDGSNEYNAYQPGSLNTTDQLIKDLENIDIVFHIGDITYANGYISQWDQFTAQVEPIASRVPYMIASGNHERDWPNTGSFYNSTDSGGECGVLAQNMYFVPAENRANFWYATDYGMFHFCIADSEHDWREGTEQYKFIEHCLATVDRQKQPWLIFVAHRVLGYSSASGYAKDGSFEEPMGRESLQRLWQKYKVDIAFYGHVHNYERTCPIYQNQCVNDERSHYSGVVNGTIHVVTGGAGSHLSKFSEVTPKWSLYRDYDFGFVKLTAFNHSSLLFEYKKSSDGKVYDSFTVSRDYKDVLACVRDGCEATTSAT 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04288 625 Pfam Purple acid Phosphatase, N-terminal domain 187 289 IPR015914 GO:0003993|GO:0046872
Viun3g04288 625 SUPERFAMILY Metallo-dependent phosphatases 300 607 IPR029052 -
Viun3g04288 625 Gene3D - 182 294 - -
Viun3g04288 625 Pfam Calcineurin-like phosphoesterase 301 516 IPR004843 GO:0016787
Viun3g04288 625 Gene3D - 295 609 IPR029052 -
Viun3g04288 625 PANTHER PURPLE ACID PHOSPHATASE-RELATED 31 609 - -
Viun3g04288 625 CDD MPP_PAPs 300 605 IPR041792 -
Viun3g04288 625 Pfam Fn3-like domain from Purple Acid Phosphatase 59 178 IPR040974 -
Viun3g04288 625 SUPERFAMILY Purple acid phosphatase, N-terminal domain 159 292 IPR008963 GO:0003993|GO:0046872
Viun3g04288 625 Pfam Iron/zinc purple acid phosphatase-like protein C 541 600 IPR025733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04288 Viun-Chr3 50613922 50618815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04288 50 603 Miscellaneous Gene Families AT2G03450 30.556 1.65e-65 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04288 K22390 - gmx:100814531 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04288 3 50613922 50618815 Viun3g00018 3 69886 79377 ECH
Viun3g04288 3 50613922 50618815 Viun3g04288 3 50613922 50618815 ECH