Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04270 ATGTTGGCTGGGTGTTCTAGTTCGACATTGTTGTCACCGAGCCACAGATTGAGGAGCGAAGCACCAGCACAGTTTCAAGCCTGCCATTTTCCGCGACCTTCCATGAGCACGCAGAGGTTGGATTTGCCATGTTCTACCTTCACTCGCAAAGACAGCTCTTCACGCTCGCAGCCCCTCAGGCCAGTGGGGCTTTCGGTGGAGAAACCCATAGAAGCCAAGACCAGCACATGTTCTCTCAAGCACAACATTCGACTCCCACCTTTGGCCATCACAGCAGCAACACCATTGGTGGAAGAGTCCATCAAGGACAAGAGTTTGAAAAGGCTCGCGGAGCACGATGAGTCCTTCACCAACGTAGCCAAGAGGAAAAAGGGTATCACCGAGTGTGACAATTCCGGTGATAACTTCTGGTTTCAGCCAAGCGTTGAGGGTAACACTTTAGGAGGGCTTAACAACACTTCACTTGCTTTCTCCCCAGAGGAAGAGACGGTTTGTTTTGTTCCTTCTGAAGTGGTGTCTCATTCTGCACCTTTCCCCTTAAACCCATGGCTGGAATCATGTGTAACAAAGATCACCAACTTCGGTGAGGGTAGCCACCGTCCTCGCCAGCATCACAACGACCATGCAACCGAAGGGTCGGTCTCCAACGCTTCTTCAGAGAGCCAAAGCCTGAGGCTAAACGAGAACGCGTCAGAACATGAAGTGGGGAACGGTTCAGGAAATCCTTACCATCACCACGAGGTGGAGACAGGGGAAGAAGATGATCATCACGGGTTGGAACTCGTTAGCTTGCTCACTGGCTGCGTGGATGCCATTGGATCAAGAAACGTCGCTGCTATAAACCAGTTCATCGCGAAACTGGGTGATCTGGCGTCGCCAAGGGGAACCCCCATAAGCCGCATATGCGCTTATTTCACAGAAGCCTTGGCCATCAGAGTCACAAGGCTCTGGCCGCATGTTTTTCACATCACCACCAATTCCCGAGACATGGTGGAGGATGACGAAACCGGAACTGCACTGAGGCTTCTGAACCAGGTGACCCCAATTCCCAAGTTTCTCCATTTCACATCAAACGAGATGCTGCTGAGGGCGTTTGAAGGGAAAGACAGAGTTCACATAATAGACTTCGACATCAAGCAAGGTCTTCAATGGCCAGGCTTGTTCCAGAGCCTAGCGTCGCGAACACACCCTCCGAGTCACGTGAGAATCACGGGGATAGGAGAGTCAAAGCAGGAGCTAAACGAAACCGGAGACAGACTGGCGGGGTTCGCGGAGGCACTGAACCTCCCCTTCGAGTTCCACCCGGTTGTGGACAGACTCGAAGACGTGAGGCTGTGGATGCTCCACGTGAAGGAGCAGGAAACGGTGGCCGTGAACTGCGTTTTGCAGCTGCACAAGACGCTTTACGACGGAAGCGGGGGAGCTCTGAGGGACTTCTTGGGGCTGATCCGCAGCACCAATCCCAGCGTGGTTGTTGTGGGTGAACAAGAAGCAGAACACAACGAGGCAAGGTTGGAAGGAAGGGTGTGCAAGTCGTTGAAGTATTACTCAGCGTTGTTTGACTGCATCGAGGAGAGTGGGGTGGCGCAGGAGAGTGCAGTGAGGGTGAAGATAGAGGAGATGTACGGCAGGGAGATAAAAAACATGGTGGCGTGTGAGGGGAGGGAGAGGTTGGAGAGGCACGAGGGTTTCGGGAAGTGGAGGAGGATGCTGGTGGAGCAAGGAGGGTTGAGATGTTTGGGGGTTTCTGAGAGGGAACTGAGTCAGAGCGAGTTGCTGTTGAAGATGTATTGTTGTGAGAGTTACAGTGTAAAGAAGGTGGAGATTGAAGGAGCAACAGGGGTTACTCTTAGTTGGGTTGACCAACCTCTGTACACTGTTTCAGCTTGGGTTCCTGTTGATGTTGCGGGTACCTCCTCCTCTTTTTCTCACCCTACTTGA 1941 0.526 MLAGCSSSTLLSPSHRLRSEAPAQFQACHFPRPSMSTQRLDLPCSTFTRKDSSSRSQPLRPVGLSVEKPIEAKTSTCSLKHNIRLPPLAITAATPLVEESIKDKSLKRLAEHDESFTNVAKRKKGITECDNSGDNFWFQPSVEGNTLGGLNNTSLAFSPEEETVCFVPSEVVSHSAPFPLNPWLESCVTKITNFGEGSHRPRQHHNDHATEGSVSNASSESQSLRLNENASEHEVGNGSGNPYHHHEVETGEEDDHHGLELVSLLTGCVDAIGSRNVAAINQFIAKLGDLASPRGTPISRICAYFTEALAIRVTRLWPHVFHITTNSRDMVEDDETGTALRLLNQVTPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPGLFQSLASRTHPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEQETVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPSVVVVGEQEAEHNEARLEGRVCKSLKYYSALFDCIEESGVAQESAVRVKIEEMYGREIKNMVACEGRERLERHEGFGKWRRMLVEQGGLRCLGVSERELSQSELLLKMYCCESYSVKKVEIEGATGVTLSWVDQPLYTVSAWVPVDVAGTSSSFSHPT 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04270 646 MobiDBLite consensus disorder prediction 195 255 - -
Viun3g04270 646 ProSiteProfiles GRAS family profile. 252 631 IPR005202 -
Viun3g04270 646 MobiDBLite consensus disorder prediction 210 236 - -
Viun3g04270 646 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 216 627 IPR005202 -
Viun3g04270 646 Pfam GRAS domain family 261 630 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04270 Viun-Chr3 50476337 50479272 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04270 1 631 GRAS Transcription Factor Family AT1G63100 56.041 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun3g04270 GRAS 4.8e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04270 - - gmx:100786173 1029.62