Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04261 ATGGCTTTCAGTGCTTCCAAGCATCCCCCAAAACGTGCCGTTTTGCTCAAAGACTACCTCCGGGACGACCTCAGCTCCTGTTCATCCAACGGTTTTAAATCGTTGCCGCGCCGACAATGCTGCACCACCGTGGGATTCTTCGTTGAGAAAGATCTCCAACTGCAACGCAAAAGAAGGAACACACTCCCTCCGCGTCGACGATCATCGGTGTCGGCTCTTCAGAGAGCTTCCGTGGCCGTAATCAACGCGATAAAGTCGCTGCCGATGTCACAGAAGAGTGGTAGAGCGAAGAGAGGTGGCGTTCTCTGTAGAAGCCTCTCGAGGAAGCTGTTGAGTAGAAGCTTCTGGAGAAAAGCAGCAGCGGTGAGGGAAGAGGGAAGCCAAGGCGTGCCGCGGAGGAGGACATCTTTCCGCGAACTCATTATGCTGGATCAGGAACATCGTAAAGCGACGTCGTTCAATGAGTATACTGCATTAGCTGCCCCGAGTTTCACCACTTCTTCTGGTTGTGGCAGTAACAGCTGGGGAGAGAGTGAATTCACGTTTGCATCTACCGCTGCTTCCTCTGAGAGCTCCAACGAAAACTACCTCCTGCTTGAGACAACCAAACAGTATACACCACGACGTCACAAGGTAGAAGAAGAAGTGATAACCAAGGAATACTGGGCAAACGAGAAAGAACAGTTTAGTCCTGTATCGATACTAGATTGTCCATTTGTAGATGAAGAAGAGATTTACAAGTCTCGTTTCAGATCCACTTCCTCTGTTGTTTCCATCACGGAAGGAGGGAAACACAAGCATATGCACAAAAGATGCCATTTGGAAAGTGTGGCTTCACTGGAGCCGGTGGTATTAGAGAAAAGGTTCGCGCGGTTAGAGCTGGGAGATGAAACACTCGACCATTCTACAAAACAATGTTCCCGCGTAGTAGTGGCAGCAGCGCGTACTCGAAATAACTTGCGTCCTGCAAACAACCACAACATTGAGGAGAATGCTCGAAATCTTCTGAACTTCGTTAAAGGTTCAAATCCACGCAACATTTTGATACTTAAGGCAGAAAACCTGTTGTTTGACTACTTCAAGAAGAGTATTGGAGAATGTAAAGACATTGATCTCTCAAAAAAGCTTCAGCTTTGCAAGGTAGCAGAGGATTGGATAAACGGGCGACCCCAAGAACTGTATTTGGATTGGGAAGAACAAGGACGAAGGTGCGTGTATGTTAGGGAGATGGACAAATGTGAAGAGTGGAAAAACTATGATCAAGAAATACAACAATTGGGTGAGGACCTGGCAAACGAAGTCTTCGCAAATCTGGTTAATGAGTCAGTGCTTGATCTTATGATACGTGCCAGCCACTGA 1359 0.4746 MAFSASKHPPKRAVLLKDYLRDDLSSCSSNGFKSLPRRQCCTTVGFFVEKDLQLQRKRRNTLPPRRRSSVSALQRASVAVINAIKSLPMSQKSGRAKRGGVLCRSLSRKLLSRSFWRKAAAVREEGSQGVPRRRTSFRELIMLDQEHRKATSFNEYTALAAPSFTTSSGCGSNSWGESEFTFASTAASSESSNENYLLLETTKQYTPRRHKVEEEVITKEYWANEKEQFSPVSILDCPFVDEEEIYKSRFRSTSSVVSITEGGKHKHMHKRCHLESVASLEPVVLEKRFARLELGDETLDHSTKQCSRVVVAAARTRNNLRPANNHNIEENARNLLNFVKGSNPRNILILKAENLLFDYFKKSIGECKDIDLSKKLQLCKVAEDWINGRPQELYLDWEEQGRRCVYVREMDKCEEWKNYDQEIQQLGEDLANEVFANLVNESVLDLMIRASH 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04261 452 PANTHER OS04G0572500 PROTEIN 10 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04261 Viun-Chr3 50341419 50344732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04261 2 446 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 26.139 5.35e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04261 - - var:108329219 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04261 3 50341419 50344732 Viun3g04261 3 50341419 50344732 ECH