Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04242 ATGTCTCTCTCCTCAATTCTATCTCAAACCCACCATTATTTCTCTGCTCAACCCACAACTACCCTTCTACTCTTCTTCCTCCTTTTCCTACTTACCTTCTACCTATGCCGAAAACCCAACCCCCAAAACCTACCACCGGGCCCACCGGGCCTCCCCTTCTTCGGGAACCTTTTATCTCTTCACCCGGACCTTCAAACTTACTTCGCTGCCTTGGCCCAGATACACGGCCCAATCTTCAAACTTCGACTCGGGAGCAAGCTCGCCATCGTCGTAACCTCACCCACCCTCGCTCGGGAGGTCCTCAAAGAACACGACACTCTTTTCGCCAACCGCGACGTCCCCGTCGCCGGTAGGGTTGCCACCTATGGCGGCTCTGACATAGTATGGACCCCGTACGGAGCCGAATGGCGGATGCTGAGGAAAGTGTGCGTGGTGAAGATGTTGAGCACCGTCACCCTGGATTCCGTCTACGATCTGCGCCGCAACGAGGTCTGCAAAATGGTGTCGTATCTGTACGACCGAGCGGGGAGTGCGGTGAACGTGGGGGAGCAGGCGTTTCTGACGGTGATGAATGTGATAACCAGTATGATGTGGGGCGGGGAGGTGGAAGGGGTGGAAAGGGAGAGTTTGGCGGCGGAGTTCAGGGAGTTGGTGGCGGAGATGACGCAGCTGCTGGGGAAGCCCAATGTTTCGGACTTTTTTCCCGGGTTGGCCCGGTTGGATTTGCAGGGCGTGGAGAAACAGATGCAGGCGCTGGTGCCCCGGTTTGATAGGATATTCGAAAGGATTATTGGTGAACGATTGAAAGTGGGTGAAAAAGAAGATGGGAAAAAGAAAGAAAGAAAAGATTTTCTGCAGTTTTTGTTGGATCTTAAGGATTCTGAAAGCGCTGATTCAAAGACGCCATTCACCATGACCCATGTTAAAGCCCTCCTCATGGATATGGTTGTGGGTGGAACCGATACATCTTCCAACACAGTAGAGTTTGCGATGGCAGAAATAATGCAGAAACCAGAGATAATGAGGAGAGTTGAAGAAGAGTTAGAAGTTGTGGTTGGAAAAGATAAGATGGTAGAAGAATCTCACATTCATAAGTTGCCTTACTTGCAAGCTGTGATGAAAGAAACTCTTCGGTTGCACCCTGCGCTTCCACTTCTAGTCCCACATTGCCCTAATCAAACCACCAATGTGGGTGGCTACACCATCACGAAGGGTTCTCGAGTCTTCGTCAATGTGTGGGCCATTCACAGAGACCCTTCCATTTGGGAAAGACCACTTGAGTTTGATCCTACGAGGTTCTTAGATGCAAACTGGGATTTCAGCGGCAATGACTTCAGTTATTTTCCCTTTGGATCTGGAAGAAGAATCTGTGCAGGAATAGCGATGGCTGAAAAGACTGTTCTGCATCTTCTTGCCACACTTGTGCACTTGTTTGATTGGACAATACCACAAGGAGAGAAGTTAGAGACAGCAGAAAAATTTGGTATTGTTCTAAGAAAGAAAATGCCTTTGGTTGCTGTTCCCACCCCACGCTTCTCCAACCCACACCTTTATAATAGAATTTAA 1566 0.4949 MSLSSILSQTHHYFSAQPTTTLLLFFLLFLLTFYLCRKPNPQNLPPGPPGLPFFGNLLSLHPDLQTYFAALAQIHGPIFKLRLGSKLAIVVTSPTLAREVLKEHDTLFANRDVPVAGRVATYGGSDIVWTPYGAEWRMLRKVCVVKMLSTVTLDSVYDLRRNEVCKMVSYLYDRAGSAVNVGEQAFLTVMNVITSMMWGGEVEGVERESLAAEFRELVAEMTQLLGKPNVSDFFPGLARLDLQGVEKQMQALVPRFDRIFERIIGERLKVGEKEDGKKKERKDFLQFLLDLKDSESADSKTPFTMTHVKALLMDMVVGGTDTSSNTVEFAMAEIMQKPEIMRRVEEELEVVVGKDKMVEESHIHKLPYLQAVMKETLRLHPALPLLVPHCPNQTTNVGGYTITKGSRVFVNVWAIHRDPSIWERPLEFDPTRFLDANWDFSGNDFSYFPFGSGRRICAGIAMAEKTVLHLLATLVHLFDWTIPQGEKLETAEKFGIVLRKKMPLVAVPTPRFSNPHLYNRI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04242 521 CDD CYP76-like 72 508 - -
Viun3g04242 521 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 Gene3D Cytochrome P450 30 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 SUPERFAMILY Cytochrome P450 45 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Viun3g04242 521 FunFam Cytochrome P450 - like protein 34 505 - -
Viun3g04242 521 PANTHER OS08G0547900 PROTEIN 17 519 - -
Viun3g04242 521 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04242 521 Pfam Cytochrome P450 45 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04242 Viun-Chr3 50118447 50121504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04242 18 518 Cytochrome P450 AT4G12300 60.119 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04242 - - vra:106769527 857.825