Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04241 ATGTTCACCCTCTCAACATTGCTTCTACTATTCTGGGTCCTTTCCACAGTTATTTACTACGCATGGCTTTATTTCTTCAAACCCAACACTCAGAGGCTTCCACCGGGCCCATCGGGCCTCCCTTTCCTCGGGAACCTTCTATCTCTTGACCCGGACCTTCACACTTACTTCGCCGCATTGGCCAAAATCCATGGCCCAATTTACAAGCTCCGACTCGGGAGCAAGCTCGCCATCGTCATAGCTTCACCAGCCGTGGCTCACGAGATCTTGAAAGACCACGACACTGTATTCGCCAACCGCGACGTCCCAGTCGCCGGCAGGGTTGCAACCTACGGCGGTTTTGACATAGCGTGGAGCCCCTACGGAGCCGAATGGCGGATGCTGAGGAAAGTCTGCACTGTAAAGATGCTGAGCAACACGACCCTGGACTCCGTGTACGATCTGCGGCGCAACGAGGTGCGTAAAACGGTGTCGTATTTGTACGGCCGAGCGGGGAGTGCAGTGAACGTGGGGGAGCAGGTGTTTCTGACGGTGATGAATGTGATAACTAGTATGATGTGGGGCGGGGCGGTGGAAGAGGCGGAGAGGGAAACTTTGGGGGCGGAGTTCAGAGAGTTGGTGGCGGAGACGACGCGGCTTCTGGGGAAGCCCAATGTCTCGGATTTTTTTCCCATGTTGGCGCGGTTCGATTTGCAAGGTGTGGAGAAAGAGATGCACGTGTTGGTGTCACGGTTCGATGGGATATTTGAAAAGATGATTGGTGAACGAGTAAAGGTGGGTGAAGAAAAAGATGGGAACAAGAAAGAAAGAAAGGATTTTCTGCAGTTTCTGTTGGATCTTAAGGATTCCCAAGATTTCGATTCGAAAACGCCATTCACCATCACACACCTCAAGGCCCTACTCATGGATATGGTTACAGGGGCAACCGATACATCATCCAACACAATTGAATTTGCAATGGCAGAAATAATTCAGAAAGCAGAGGTAATGAAGAGAGTTGAAGAAGAGTTAGAAGATGTGGTTGGAAAAGATAAGATGGTAGAAGAAACTCACATTCGTAAGTTGCCTTACCTGCAAGCTGTGATGAAAGAAACTCTTCGGTTGCACCCTGCGCTTCCACTTCTAATCCCACATTGCCCTAGCCAAACCACCAATGTGGGAGGCTACACCATCCCGAAGGGTTCTCGAGTCTTCATCAATGTGTGGGCCATTCACAGAGACCCTTCCATTTGGGAAAGACCACTCGAATTTGACCCTTCAAGGTTCCTAGATGCAAACTGGGATTTCAGTGGCAATGACTTCAGTTATTTCCCCTTTGGATCTGGAAGAAGAATTTGTGCAGGAATAGCAATGGCTGAGAGAACATTTCTATATTTTCTGGCAACACTTCTACACTTATTTGATTGGAGAATACCAGAAGGAGAGAATTTGGATTTATCAGAGAAATTTGGTATTGTTCTAAAAAAGAAAACACCTCTAGTTGCCATCCCCACCCCGCGCTTCTCCAACCCACATCTTTACAATTGA 1527 0.4859 MFTLSTLLLLFWVLSTVIYYAWLYFFKPNTQRLPPGPSGLPFLGNLLSLDPDLHTYFAALAKIHGPIYKLRLGSKLAIVIASPAVAHEILKDHDTVFANRDVPVAGRVATYGGFDIAWSPYGAEWRMLRKVCTVKMLSNTTLDSVYDLRRNEVRKTVSYLYGRAGSAVNVGEQVFLTVMNVITSMMWGGAVEEAERETLGAEFRELVAETTRLLGKPNVSDFFPMLARFDLQGVEKEMHVLVSRFDGIFEKMIGERVKVGEEKDGNKKERKDFLQFLLDLKDSQDFDSKTPFTITHLKALLMDMVTGATDTSSNTIEFAMAEIIQKAEVMKRVEEELEDVVGKDKMVEETHIRKLPYLQAVMKETLRLHPALPLLIPHCPSQTTNVGGYTIPKGSRVFINVWAIHRDPSIWERPLEFDPSRFLDANWDFSGNDFSYFPFGSGRRICAGIAMAERTFLYFLATLLHLFDWRIPEGENLDLSEKFGIVLKKKTPLVAIPTPRFSNPHLYN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04241 508 Pfam Cytochrome P450 34 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 Coils Coil 316 336 - -
Viun3g04241 508 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 Gene3D Cytochrome P450 26 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 CDD CYP76-like 61 497 - -
Viun3g04241 508 PANTHER OS08G0547900 PROTEIN 8 508 - -
Viun3g04241 508 FunFam Cytochrome P450 - like protein 23 494 - -
Viun3g04241 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Viun3g04241 508 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04241 508 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04241 Viun-Chr3 50110893 50113693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04241 13 507 Cytochrome P450 AT4G12320 60.040 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04241 - - vra:106769527 783.482