Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04204 ATGGCAACAAAGCTTCTGTGGCTTTCTCTGCTGATTCTAAATCTGCTCCTTCACACGTCTAGCACCGTGGGATCCGAAACTGCGGCAACAGACTTCATCAAGTCCTCATGCAAGGAGACAAGGTACCAGGTGGCGTGCGTTAAAACGCTCTCAGGCTACGGCAGCAAGATTGGGAAGAGCGAGCAAGCACTAACGAGCGCTGCGCTGAGCGCGAGCGTATCGAAGATTGTATCATGCGTATCGTCTCTTAAGGAAATGGAGAAGGCGAAGGAACTGAAAGCAAGAGAGCTGAAAGCGGTGCGAGATTGCATAGAGAACATGAATTATAGCGTGGATAGTCTTAACCGATCGGTGAAGGAGCTGGACCTGCTGGGTAATCCGAAGGGGAAGGATTCACGGTTGCACGTGAGCAATGTTCAGAGTTGGGTTAGTGCTGCTATCACTGATCAGGACACGTGTATTGGCAGCATTACTGATGCTAGTTTCAAGTCTTCCATCAAACATAAGCTTCTGGATGCTTCTCATGTCACCACTAATGCTCTTGCATTGGTTAATCGCTTGGCCTCCAACTACCACACTCAGACGCCATGA 591 0.4941 MATKLLWLSLLILNLLLHTSSTVGSETAATDFIKSSCKETRYQVACVKTLSGYGSKIGKSEQALTSAALSASVSKIVSCVSSLKEMEKAKELKARELKAVRDCIENMNYSVDSLNRSVKELDLLGNPKGKDSRLHVSNVQSWVSAAITDQDTCIGSITDASFKSSIKHKLLDASHVTTNALALVNRLASNYHTQTP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04204 196 NCBIfam pectinesterase inhibitor domain 8 187 IPR006501 GO:0004857
Viun3g04204 196 SMART PMEI_2 28 183 IPR006501 GO:0004857
Viun3g04204 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 188 IPR035513 -
Viun3g04204 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 183 - -
Viun3g04204 196 CDD PMEI-like_3 35 189 - -
Viun3g04204 196 Pfam Plant invertase/pectin methylesterase inhibitor 31 183 IPR006501 GO:0004857
Viun3g04204 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 189 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04204 Viun-Chr3 49720777 49722432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04204 33 187 Carbohydrate Esterase AT3G14310 26.875 2.14e-15 72.0