Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04201 ATGGTCAGAAAGTCACACAAGAATTCGACGCGTGTAGTCTTGAGATTGGTGTGGTGTTTTAGACAAGGAACCAATAAACTGTGTTTATCAAAGTTGGAATCCAAGTATGCTCAATTGGGTAACGGTTCAACAGATCTACCAAAGGGACATTTGACAGTGTGTGTAGGCGAATCAGAAGATGAGAAGCAACGTGTTTTGGTGCCAGTTACTCACTTCAATCACCCCCTTCTCGGAAAGCTATTGGAAGATGCAGAGAAAGTTTACGGCTTCGATTATCCTGGTGTAATAACCATACCCTGCACAATCTCTGAGTTCCAGAGAGTTCAGAACATTATTGCCACCACTCCAACCTACAACAGGCCCCTTACAATTTGTTGTTTCATCAACTGA 390 0.4282 MVRKSHKNSTRVVLRLVWCFRQGTNKLCLSKLESKYAQLGNGSTDLPKGHLTVCVGESEDEKQRVLVPVTHFNHPLLGKLLEDAEKVYGFDYPGVITIPCTISEFQRVQNIIATTPTYNRPLTICCFIN 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04201 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 107 IPR003676 GO:0009733
Viun3g04201 129 Pfam Auxin responsive protein 40 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04201 Viun-Chr3 49696804 49697193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04201 35 112 Calmodulin-binding Proteins AT4G34750 37.805 3.15e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04201 K14488 - gmx:102668727 165.622