Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04159 ATGGGTAAGGTTCACGGATCTCTCGCTCGTGCGGGCAAAGTGAGAGGACAAACTCCTAAGGTCGCCAAGCAAGACAAGAAGAAGAAGCCACGTGGACGCGCTCACAAGCGAATGCAATACAATCGCCGATTCGTCACCGCCGTGGTGGGATTCGGAAAGAAGCGTGGACCAAACTCGTCGGAGAAGTGA 189 0.545 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04159 62 MobiDBLite consensus disorder prediction 22 40 - -
Viun3g04159 62 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 1 62 - -
Viun3g04159 62 Pfam Ribosomal protein S30 3 59 IPR006846 GO:0003735|GO:0005840|GO:0006412
Viun3g04159 62 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04159 Viun-Chr3 49259868 49260670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04159 1 62 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.774 1.14e-30 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04159 K02983 - dcr:108209471 118.627