Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04028 ATGGGAAGTGGAGTTTCAAGTCTGTGTTGGTGCTACGGGAGGAACCAACCGGGCCACCAGGATGTTATATTCACGGCCACCGAGCCATTGGACGAAACCCTAGGACACTCCTTCTGTTACGTCAGATCCTCCGCTCGCTTCCTCTCACCAACTCACTCCGATCGCTTCCTCAGCCCCTCCACCTCCCTCCGCTTCTCCCCCACTCAGGAGCCCCGAACCCGACCCGAATCCCATGAAACCGGTTTCAAAGCCATTTCCGGAGCCTCCGTTAGCGCCAACAGCTCTCTCCCCACTACAGTCATTCACTTTGACGAAGAAACTCTCGATTGCGTCGGAGCTACCACCAAGGGCAATATCGTCAATGGCTTCGAAAGCACGGCGTCGTTTACCGCGCTCCCGCTCCAGCCCGTTCCCCGAGGCGGCGAGCCCTTCCAGGTTAGCGGCTTCTTTCTATCCGGTCCAATTGAAGCCAACGCCGTCTCCGGTCCTCTACCCGCCGCCGAAGGCGGCGGAGGCGGCGGCGATGTTCCCTTTTCTGCGCCGCTCAGCGGGCTCTATGGAAAGAAGAGCAGGAAGAAGAAGGTCATTTCGGGATTCCGGAAGGCGTTCAATCGGAACGCGACGGAGATGAAGAGGCCGTGGGTGGTGCCGGTTCCGGAGAAGAAGGAGGCGGCGGCGGCGGAGGCGAGGGGCGGGGAGGGCAATGTGCAGTGGGCGTTGGGGAAGGCTGGGGAGGATCGCGTCCACGTGGTGGTGTCCGAGGAGCAAGGGTGGTTGTATGTTGGGATTTACGACGGTTTCAATGGCCCCGACGCGCCGGAGTTTCTGATGGGGCACCTCTATCGTGCCGTTCACAGCGAGCTACAAGGCTTGTTCTGGGAGCTGGAAGACGAACAACCGTTGCCGCAAGAGAGTAATCCCGTGGTGGAAGGAACGGAGAGTAAACGGCGTAAACTGTGGGAGCTTCTCGCTGAGGACGGACTCGACCTTTCTGGTTCGGATAGGTTCGCGTTTTCCGTGGACGATGCGTTGAGCGTTAACAACGCCAATGCCGGGTCTGCTGTGAGTAGGAGGTGGCTGTTGCTGTCGAAGTTGAAGCAGGGGTTGTCGAAGCAGAAGGAGGGTGAAGGGAGGGGGTGGAATTTGGGTAATGAGGAGAAGGAAAAGGAGAAGCCCTCTGGGAGGAAGCGGAAGGTGGGTCCTGTGGATCATAGGCTTGTTTTGAATGCGTTGTCTCGGGCACTACAAGTCTCGGAGGTTGCGTATTTGGATATGACGGACAAGCTTTTGGATACGAATCCGGAGCTTGCTTTGATGGGCTCGTGTTTGTTGGTTGTGTTGATGAGGGATGAGGATGTGTATGTGATGAATGTTGGGGATAGTAGGGCTATTGTTGCACACTATGAACCCAAGGATGTTGATTCTAGTGTTGAATCGGGAAGCAAGGGAGGTGTTGAGTCTGGTGCTGAGAACATAGTTGAGGAGTCATTGGGTTTGGGTCAAAGCGCAAATGCTCAACAAATGAGGTTGGCGGCGTTGCAACTCTCTACTGACCACAGCACCAGCATTGAAGAAGAAATCATTAGGATTAAAAACGAGCATCCTGATGATACCCAATGTATAGTCAATGACCGAGTTAAAGGTCGCCTGAAGGTCACCAGAGCATTTGGAGCTGGGTTTTTGAAACAGCCGAAGTTGAATGATGCCGTACTAGAGATGTTTCGAAATGAATATATTGGCACTGCTCCGTATATTTCCTGCACTCCTTCACTACGTCACCATAGATTATGCCAGAGAGATCAGTTCCTGATCCTTTCATCTGATGGTTTATATCAATATCTAAACAATGAAGAAGTGGTTTCTCATGTTGAGAGTTTCATAGAAAAATTTCCTGAAGGAGATCCAGCCCAACATTTAATAGAAGAGGTGCTTCTCCGTGCAGCTAAGAAAGCTGGAATGGATTTTCATGAATTGCTTGATATACCACAAGGAGATCGGAGGAAGTATCACGATGATGTTACTGTCATGGTGATATCACTTGAAGGGAGAATCTGGAAATCGTCAGGAAAATATCCGTGA 2079 0.5253 MGSGVSSLCWCYGRNQPGHQDVIFTATEPLDETLGHSFCYVRSSARFLSPTHSDRFLSPSTSLRFSPTQEPRTRPESHETGFKAISGASVSANSSLPTTVIHFDEETLDCVGATTKGNIVNGFESTASFTALPLQPVPRGGEPFQVSGFFLSGPIEANAVSGPLPAAEGGGGGGDVPFSAPLSGLYGKKSRKKKVISGFRKAFNRNATEMKRPWVVPVPEKKEAAAAEARGGEGNVQWALGKAGEDRVHVVVSEEQGWLYVGIYDGFNGPDAPEFLMGHLYRAVHSELQGLFWELEDEQPLPQESNPVVEGTESKRRKLWELLAEDGLDLSGSDRFAFSVDDALSVNNANAGSAVSRRWLLLSKLKQGLSKQKEGEGRGWNLGNEEKEKEKPSGRKRKVGPVDHRLVLNALSRALQVSEVAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKDVDSSVESGSKGGVESGAENIVEESLGLGQSANAQQMRLAALQLSTDHSTSIEEEIIRIKNEHPDDTQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDAVLEMFRNEYIGTAPYISCTPSLRHHRLCQRDQFLILSSDGLYQYLNNEEVVSHVESFIEKFPEGDPAQHLIEEVLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04028 692 ProSiteProfiles PPM-type phosphatase domain profile. 223 680 IPR001932 -
Viun3g04028 692 SUPERFAMILY PP2C-like 242 681 IPR036457 -
Viun3g04028 692 MobiDBLite consensus disorder prediction 59 79 - -
Viun3g04028 692 MobiDBLite consensus disorder prediction 373 399 - -
Viun3g04028 692 SMART PP2C_4 229 678 IPR001932 -
Viun3g04028 692 Pfam Protein phosphatase 2C 513 649 IPR001932 -
Viun3g04028 692 PANTHER PROTEIN PHOSPHATASE 2C 221 679 IPR015655 GO:0004722|GO:0006470
Viun3g04028 692 CDD PP2Cc 403 680 IPR001932 -
Viun3g04028 692 Gene3D - 219 687 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04028 Viun-Chr3 47875934 47881098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04028 1 691 PP2C-type Phosphatase Gene Family AT2G35350 55.905 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04028 - - gmx:100781535 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02263 2 30257417 30262845 Viun3g04028 3 47875934 47881098 PCT