Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04019 ATGGCTGATGCAGTTGGCATGCCTGAGCAGGACACACCGATTTTTTCCGGCAACAATGTCCGTCCAAGGTTGGATGTCTATGTTTGGGACATGGATGAGACGCTTGTACTACTCAACTCCTTGCTGAAATCATCATATGCAGAGGCTTTTAACGGTCTGAAGGATGTGCAGAAGGGAGTTGAAATCGGGAGGATGTGGGAAAATCTCATTCTACAAACATGTGATGATTATTTCTTCTATGAACAAATTGAAAATTACAATAAGCCATTTCTTGATGCTCTGGCCCAATATGATGATGGGAGGGACTTATCTGATTACGACTTCAACAAAGATGAATTAGGCGCCCCTCAAGATGATGCGAACAAAAGAAAACTTGCATATAGGCATCGAGTCATTGCCGAAAAGTACATACAGGGTTTACAGAATATTTTAGATCAAGAGACAATAAAACACTGGGATGAATTGTATGATAAAACTGATGAATACACTGACAGGTGGCTTTCATCAGCACGAACCTTTTTAAAGGAGTGTTTGGGCGAAGATGAAGATGCAGTTTCTTCAGTTGCTTCTTCTGACATCAGCTATAACTCAACTAATGTAAAGCATGTTAATGTTTTAGTGACCTCTGGATCGTTAATTCCCTCACTTGTGAAATGTTTACTCTTTCGTCTGGACAGCTTGATAAGCCATGGAAATGTTTATAGCTCATGGGAAGTGGGAAAAACTCAATGTTTCCGATGGATCAAGGAGCGTTTCAACCATCCTAATGTTCGCTTTTGTGTATTTGGAGATGGATGGGAAGAGTGTGAAGCTGCAGAAATCATGAGATGGCCATTTGTCAAGATTGATCCACGGCCAGGAAAACTTCACAGGTTCCCTGGTCTTACTTTGACAACAGTTAGCCACTACTTTTCTGTGGTGTATGGAAGGCCAAACAATGAGAATGAAGATGGTTGA 957 0.4117 MADAVGMPEQDTPIFSGNNVRPRLDVYVWDMDETLVLLNSLLKSSYAEAFNGLKDVQKGVEIGRMWENLILQTCDDYFFYEQIENYNKPFLDALAQYDDGRDLSDYDFNKDELGAPQDDANKRKLAYRHRVIAEKYIQGLQNILDQETIKHWDELYDKTDEYTDRWLSSARTFLKECLGEDEDAVSSVASSDISYNSTNVKHVNVLVTSGSLIPSLVKCLLFRLDSLISHGNVYSSWEVGKTQCFRWIKERFNHPNVRFCVFGDGWEECEAAEIMRWPFVKIDPRPGKLHRFPGLTLTTVSHYFSVVYGRPNNENEDG 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04019 318 Gene3D - 25 292 IPR038102 -
Viun3g04019 318 FunFam Eyes absent homolog 25 292 - -
Viun3g04019 318 NCBIfam EYA conserved domain 25 300 IPR006545 GO:0007275
Viun3g04019 318 PANTHER EYES ABSENT 24 304 IPR028472 GO:0004725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04019 Viun-Chr3 47797775 47803879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04019 24 315 Protein tyrosine phosphatase (PTP) family AT2G35320 61.224 1.06e-136 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04019 - - gmx:100799315 575.474