Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03973 ATGCTCACCACCCTCCCTCCCTCCGACCCCCTCGTGGGCAACCCATTCTCCGCCTTCTCTGTCGACTTCACCGCCTGGGAGGACGACTCCCACCACCTCCTCTCCCCCAAACCCGTCACTTCCAGCTCCGGCTCCGACAAACCGGAGCCGGAGACAGCTGAACCGGACCAACCGGTGGTGTCGGTGGTGGACGAGCGGAAACTCCGGCGCATGATATCGAACCGCGAATCTGCCCGCAGGTCTCGCATGCGAAAACAGAGACACCTGGAGAACCTTCGGAACCAGTTGAACAAGTGCAGGGTCGAAAACCGGGAACTGAATAACCGGTTGCAGTTCGTCCTGCACCACTGTAACCGCCTCCGTAACGAAAACGAATGGCTCCGGTCCCAGCGAACCCTCCTCCTCCAAAAAGTCGCCAACTTAACCCAAATTTTGATTTTCCAACAATTCCAACAACCCATCTCCCCTGCATGGACATGCAACACTTCGCTCATCCCAATTAATCAAGTTAATTAA 516 0.562 MLTTLPPSDPLVGNPFSAFSVDFTAWEDDSHHLLSPKPVTSSSGSDKPEPETAEPDQPVVSVVDERKLRRMISNRESARRSRMRKQRHLENLRNQLNKCRVENRELNNRLQFVLHHCNRLRNENEWLRSQRTLLLQKVANLTQILIFQQFQQPISPAWTCNTSLIPINQVN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03973 171 SUPERFAMILY Leucine zipper domain 66 118 IPR046347 GO:0003700|GO:0006355
Viun3g03973 171 FunFam BZIP transcription factor 64 115 - -
Viun3g03973 171 SMART brlzneu 62 126 IPR004827 GO:0003700|GO:0006355
Viun3g03973 171 Pfam bZIP transcription factor 66 124 IPR004827 GO:0003700|GO:0006355
Viun3g03973 171 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 69 84 IPR004827 GO:0003700|GO:0006355
Viun3g03973 171 Gene3D - 64 145 - -
Viun3g03973 171 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 64 127 IPR004827 GO:0003700|GO:0006355
Viun3g03973 171 CDD bZIP_plant_GBF1 67 118 IPR045314 GO:0003700|GO:0006355
Viun3g03973 171 MobiDBLite consensus disorder prediction 31 60 - -
Viun3g03973 171 Coils Coil 75 123 - -
Viun3g03973 171 PANTHER BZIP TRANSCRIPTION FACTOR 44 40 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03973 Viun-Chr3 47143533 47144613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03973 1 149 bZIP Transcription Factor Family AT3G49760 39.623 4.12e-29 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun3g03973 bZIP_1 3.7e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03973 - - gmx:100809244 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02232 2 29969354 29970604 Viun3g03973 3 47143533 47144613 PCT