Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03959 ATGCAAATTGACAATCTTTTGCGTGAGAGAGGGAGAGAACCTAAGTATGTTGGTCCATATAGGGTAACTGATGATGAGTCTCTAGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGATTGATGATTGAAGCAAAGCTTTCTCCTGGACCCTCCATTTGCAATATTCGTCGACATGGTGACAATAGCCGTTTGCATGAAGTTGGTGTCAGTGTTGCAAGTGGAAACTTTCTTGCAGCCAAGAGAAGAGGGGTTGTCAAAGGAGTTGATTTTGGGTCAACTGGGGAGGTTAAAAAAGTTGACGTTTCTCGCATGCATGAGAGGCTTGATGGCAACTGCATTGTTATTTTAAGCAACTTGGGTTACTCCAGCTCTGGAGAAGTATTAGATTGCAATTATGGACCAATGGGGAGGTTGTTGCCTTGTGACAAGGTCAAAGGTTCTAGTTGTGGTTCAGCCTCTGCTCTCAATACCTATGAAGTTGCAACAGCTTGTGCGTTGGCAATAGAAGCAGACAAGCTTATATGCATCATGGATGGTCCTATCCTGGATGAAAGTGGACACCTTATTAGCTTCTTGACTCTTCAAGAGGCAGACATGCTAATCCGTAAACGGGTTGAGCAAAGTGAAACAGCTGCTAACTATGTCAAAGCTGTTGCGGAAGAAAGTTTCAACACACTTAATAAATTTAATGGGGCTCTGCCAAATGGAGAACCATTTTCAGGATATCATATTGCAACCTTTCATAATGGTGTTGGTTTTGAAAATGGGAATGGCCTTTGGTCTGGGGAGCAGGGTTTTGCTATTGGAGGTCAGGAGTCCCTAAGTCGGACGAATGGTTACCTATCAGAGCTAGCTGCTGCAGCTTTCGTTTGCAGAGGCGGTGTTCAAAGAGTTCATTTGTTGGATGGCACTATTAGTGGAGTTCTCTTGTTGGAATTGTTCAAGAGAGATGGGATGGGGACAATGGTGGCAAGTGACCTTTATGAAGGCACCCGGATGGCTCAAGTAACTGATATTTCTGGAATTAAACAACTTATCCAGCCTTTACAGGAGTCTGGCATATTAGTTATGCGGACTGATGAAGAGCTGCTTCAATCGTTGGGCTCCTTCGTTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGCGCTGCCCTTTTTCCTTTCTTTGAAGAGAAGTGTGGAGAGGTTGCTGCAATTGCAGTATCCCCTGATTGTAGAGGCCAAGGACAGGGAGACAAATTACTTGATTATATAGAGAAGAAGGCATCATATCTGGGATTTGAAATGCTTTTCTTGCTTACAACTCGTACAGCTGATTGGTTTGTGAGACGTGGATTTTCGGAATGTTCAATTGATTTTATTCCTGAGAAGAAAAGGAGAAAGATTAATCTATCCCGCAAGTCCAAGTATTACAGGAAGAAGCTTCTACCCAGTAAGAGTGGAATTACGTTTGGTAGCAATTTTTCTTCCCCTTAG 1476 0.4322 MQIDNLLRERGREPKYVGPYRVTDDESLAAAMEAAGRIRLMIEAKLSPGPSICNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGVDFGSTGEVKKVDVSRMHERLDGNCIVILSNLGYSSSGEVLDCNYGPMGRLLPCDKVKGSSCGSASALNTYEVATACALAIEADKLICIMDGPILDESGHLISFLTLQEADMLIRKRVEQSETAANYVKAVAEESFNTLNKFNGALPNGEPFSGYHIATFHNGVGFENGNGLWSGEQGFAIGGQESLSRTNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDISGIKQLIQPLQESGILVMRTDEELLQSLGSFVVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASYLGFEMLFLLTTRTADWFVRRGFSECSIDFIPEKKRRKINLSRKSKYYRKKLLPSKSGITFGSNFSSP 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03959 491 Gene3D - 1 328 IPR036393 -
Viun3g03959 491 Hamap Amino-acid acetyltransferase [argA]. 1 475 IPR010167 GO:0004042|GO:0005737|GO:0006526
Viun3g03959 491 PANTHER AMINO-ACID ACETYLTRANSFERASE 147 483 IPR010167 GO:0004042|GO:0005737|GO:0006526
Viun3g03959 491 Gene3D - 329 475 - -
Viun3g03959 491 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 329 477 IPR000182 GO:0016747
Viun3g03959 491 Pfam Acetyltransferase (GNAT) family 368 432 IPR000182 GO:0016747
Viun3g03959 491 NCBIfam amino-acid N-acetyltransferase 284 475 IPR010167 GO:0004042|GO:0005737|GO:0006526
Viun3g03959 491 CDD NAT_SF 370 432 - -
Viun3g03959 491 SUPERFAMILY Carbamate kinase-like 2 325 IPR036393 -
Viun3g03959 491 PIRSF ArgA 1 139 IPR010167 GO:0004042|GO:0005737|GO:0006526
Viun3g03959 491 PIRSF ArgA 135 475 IPR010167 GO:0004042|GO:0005737|GO:0006526
Viun3g03959 491 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 332 478 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03959 Viun-Chr3 46945414 46953558 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun3g03959 Acetyltransf_1 7.9e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03959 K14682 - gmx:100800925 812.757