LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun3g03957	ATGGCGGCTTTGTCTTCCACCTCTCGCACATCCTTTCCAAACCTTCCCAATTGTTCATCCCACAAATTCAATTTCCACCCACAGCTACTCAATTTACGCCCTCGCTCACCAAAATTCAAGCCAAACAAGCCGTTATCTTTTACGAGAGTCCCAACCTCAACATTGGAGCCCTGCAACGTGTTCAGCGAGGAACTGGTCGGAAGCGTGGCGGAAGACGAGGGTTACAGCAGCTCCATGGACGATAAGCGATTCGTGCGTTGGTTTCGTGAGACGTGGCCATACTTGAGGGTCCACCGCGGTGCGACCTTCGTTATCATCGTTTCCGGTGAAATTGTCGCTAGTCCTTACTTGGATCCTATTCTCAAGGATATAGCATTTCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGGACCCATATGCAAATTGACAATCTTTTGCGTGAGAGAGGGAGAGAACCTAAGTATGTTGGTCCATATAGGGTAACTGATGATGAGTCTCTAGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGATTGATGATTGAAGCAAAGCTTTCTCCTGGACCCTCCATTTGCAATATTCGTCGACATGGTGACAATAGCCGTTTGCATGAAGTTGGTGTCAGTGTTGCAAGTGGAAACTTTCTTGCAGCCAAGAGAAGAGGGGTTGTCAAAGGAGTTGATTTTGGGTCAACTGGGGAGGTTAAAAAAGTTGACGTTTCTCGCATGCATGAGAGGCTTGATGGCAACTGCATTGTTATTTTAAGCAACTTGGGTTACTCCAGCTCTGGAGAAGTATTAGATTGCAATTATGGACCAATGGGGAGGTTGTTGCCTTGTGACAAGGTCAAAGGTTCTAGTTGTGGTTCAGCCTCTGCTCTCAATACCTATGAAGTTGCAACAGCTTGTGCGTTGGCAATAGAAGCAGACAAGCTTATATGCATCATGGATGGTCCTATCCTGGATGAAAGTGGACACCTTATTAGCTTCTTGACTCTTCAAGAGGCAGACATGCTAATCCGTAAACGGGTTGAGCAAAGTGAAACAGCTGCTAACTATGTCAAAGCTGTTGCGGAAGAAAGTTTCAACACACTTAATAAATTTAATGGGGCTCTGCCAAATGGAGAACCATTTTCAGGATATCATATTGCAACCTTTCATAATGGTGTTGGTTTTGAAAATGGGAATGGCCTTTGGTCTGGGGAGCAGGGTTTTGCTATTGGAGGTCAGGAGTCCCTAAGTCGGACGAATGGTTACCTATCAGAGCTAGCTGCTGCAGCTTTCGTTTGCAGAGGCGGTGTTCAAAGAGTTCATTTGTTGGATGGCACTATTAGTGGAGTTCTCTTGTTGGAATTGTTCAAGAGAGATGGGATGGGGACAATGGTGGCAAGTGACCTTTATGAAGGCACCCGGATGGCTCAAGTAACTGATATTTCTGGAATTAAACAACTTATCCAGCCTTTACAGGAGTCTGGCATATTAGTTATGCGGACTGATGAAGAGCTGCTTCAATCGTTGGGCTCCTTCGTTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGCGCTGCCCTTTTTCCTTTCTTTGAAGAGAAGTGTGGAGAGGTTGCTGCAATTGCAGTATCCCCTGATTGTAGAGGCCAAGGACAGGGAGACAAATTACTTGATTATATAGAGAAGAAGGCATCATATCTGGGATTTGAAATGCTTTTCTTGCTTACAACTCGTACAGCTGATTGGTTTGTGAGACGTGGATTTTCGGAATGTTCAATTGATTTTATTCCTGAGAAGAAAAGGAGAAAGATTAATCTATCCCGCAAGTCCAAGTATTACAGGAAGAAGCTTCTACCCAGTAAGAGTGGAATTACGTTTGGTAGCAATTTTTCTTCCCCTTAG	1899	0.4481	MAALSSTSRTSFPNLPNCSSHKFNFHPQLLNLRPRSPKFKPNKPLSFTRVPTSTLEPCNVFSEELVGSVAEDEGYSSSMDDKRFVRWFRETWPYLRVHRGATFVIIVSGEIVASPYLDPILKDIAFLHHLGIRFVLVPGTHMQIDNLLRERGREPKYVGPYRVTDDESLAAAMEAAGRIRLMIEAKLSPGPSICNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGVDFGSTGEVKKVDVSRMHERLDGNCIVILSNLGYSSSGEVLDCNYGPMGRLLPCDKVKGSSCGSASALNTYEVATACALAIEADKLICIMDGPILDESGHLISFLTLQEADMLIRKRVEQSETAANYVKAVAEESFNTLNKFNGALPNGEPFSGYHIATFHNGVGFENGNGLWSGEQGFAIGGQESLSRTNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDISGIKQLIQPLQESGILVMRTDEELLQSLGSFVVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASYLGFEMLFLLTTRTADWFVRRGFSECSIDFIPEKKRRKINLSRKSKYYRKKLLPSKSGITFGSNFSSP	632

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun3g03957	632	Gene3D	-	470	616	-	-
	Viun3g03957	632	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	470	618	IPR000182	GO:0016747
	Viun3g03957	632	Gene3D	-	82	469	IPR036393	-
	Viun3g03957	632	Pfam	Amino acid kinase family	103	339	IPR001048	-
	Viun3g03957	632	CDD	NAT_SF	511	573	-	-
	Viun3g03957	632	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	473	619	IPR016181	-
	Viun3g03957	632	Hamap	Amino-acid acetyltransferase [argA].	77	616	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Viun3g03957	632	NCBIfam	amino-acid N-acetyltransferase	425	616	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Viun3g03957	632	SUPERFAMILY	Carbamate kinase-like	79	466	IPR036393	-
	Viun3g03957	632	Pfam	Acetyltransferase (GNAT) family	509	573	IPR000182	GO:0016747
	Viun3g03957	632	CDD	AAK_NAGS-ABP	83	464	IPR033719	-
	Viun3g03957	632	PANTHER	AMINO-ACID ACETYLTRANSFERASE	288	624	IPR010167	GO:0004042\|GO:0005737\|GO:0006526

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun3g03957	Viun-Chr3	46945414	46953758	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Viun3g03957		AA_kinase	8.5e-06	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun3g03957	K14682		-	gmx:100800925	996.112