Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03932 ATGAAACCTCACCATCATCATTTCACCTTCTTTTTCATTCTATCATCGTTCTCTCTACTTCCCACTTCCAGAGCTACCAACACAACTCAATTCAGCATTTTCAATGAAACAAGAAGGATTCTCCACCAGCCTTTGTTCCCGGAGCTCTCGGCTCCGCCGCCACTCACCCCACCGCCGCCACCGCCCCCGGATATTCCTTCCTCTCCCGACATTCCTTTCTTCAATGAGTATCCCGCGGGGCAGCCGCCGCCAGCGCAGAACCTGCCTCCGGCAACATCCTCCGGCGCTGTGATCGCGAACCCGACGGCGACGCAGCCCACGAAGCCTGCGAAGAAGGTGGCAATTGCGATCTCCGTGGGAATCGTGACGCTGGGAATGTTCTCCGCGTTGGGCTTCTTCTTGTACAGGCACAGAGCAAAACACCCGGTGGAAACTCAGAAACTCGTTTCTCGTAGGCTTCCGGAAGATTCTCCGCGGGCCCCACCACCCTCGAGCTTCCTCTACATTGGAACGGTGGAGCCCGCCAGAACGTCGCTCACCGAACCCAACGGAACGAACATCATCACTTCTCCTTATCGAAAGCTTGATTCTATTAAGCTTAACTCCGATCACCGTTACCGCCCCAGTCCCGAGCTGCAGCCTCTGCCGCCGCCTCAAAAGCCGCCAGACGAAAGCCACTCGCCGCCGGCAGGATTCTCCGACTCATCATCATCGTCCGAGGAGGAAAGCTGTGAGACGGCATTTCACTCGCCGCACGGCTCGTCGCTTAGCCGCGAAGAGAATTGTTTCACGCCCGTGTCGCGCCACAGTTTTCTCGCCGCCGCCATACCAGCGGCTGGTGCTGCTGCTCCGGTGGTTCCTTACTCGAAGAGAACTTCACCGAAATCCCGGTTCTCTGCTCCCTCGCCGGATATCAGAAACATGGTCGTACCACCGGCGAAGCATTCTCCGCCGCCGGCACTGGCGCCACCAGCTTCAACCGAATATGAGCAAATAGAAAAAGTAACTACCTTGGGTCCTTCTAGAAGACCAAAGTTCTCATCGCCTCCCCCAGCACCGAATTTGACTCATCTTATCAAGCCTGCTGCTCCACCCCCACCTCCACCTCCTCCTCCCCCGCCGTCGTTTCCGTCGTCACGGAAGGGTTGGTCTCCGTCAATTAGTGCATCTTCGTCCTCTGTGTCAAGGAAGCAGCGAGAGTCTTGGTCTCCGAATGGAGGAGTATCTTCTGCTAACAGTGCTAGTCTAAGGAAAGGTTCTACTGAGGAAGTTGACAAAAGAAATGCAGGTGATGACGTGGATGGAGCGAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTTTGTGCTACTTCGGACCGTACCACTGTGTGGGATCAGTTAAAATCCAGCTCCTTTCAGTTAAATGAGGACATGATGGAGACCCTGTTTGGCTGCAAATCTTCAGGTTCTGCTTTTAAAGAGACTGTCACTAGAAGATCAGTTCTTCCCCCTGTTGAACTCGAGAACAGGGTCTTAGACCCCAAGAAATCCCAAAACATAGCTATACTACTAAGGGCACTTAATGTCACAAGAGATGAGGTGTGCGAAGCTCTTTTGGATGGGAACCCTGAAGGTTTGGGAACTGAGCTATTGGAGACTCTAGTGAAGATGGCACTAACAAAGGAGGAGGAAATAAAACTTAAAAATTATGATGGTGACCTATCAAGACTTGGTTCTGCAGAAAGATTTCTTAAAGCAGTCCTTGATATCCCTTTAGCTTTTAAAAGAATTGAAGCCATGCTGTACAGAGCAAATTTCGAAACAGAAGTTAACTACCTTAGGAAGTCCTTTCAGACACTGGAGGCTGCAAGTGAGGAATTAAAGCACAGTCGGCTATTCCTCAAACTTCTTGAAGCCGTTCTAAGGACAGGAAACAGAATGAATGTTGGCACAAACCGTGGTGATGCTAAATCTTTCAAACTAGACACACTTCTAAAACTGGTAGATATAAAGGGCACAGATGGGAAGACAACACTTCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGAACAGATGGTGAATCTGCAAACGAAAATGTTCAAAACCAAACAACTTCCCAATTCAACGAGGACGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGACTGAGTAGAGACCTAGGTAATGTCAAAAAGGCAGCAGGAATGGACTCGGATGTGTTGAGAAGCTATGTCTCAAAGCTTGAAAGTGGGCTTGATAAAGTGAGCTTAGTTTTGCAGTGCAGAAAGCCAGATATGTATGGAAATTTCTTTAACTCAACTGGGCTATTTCTGAAAGACGCTGAAGAGGAAATTGTTAGGATCAAGGCTGATGAGAGAAAGGCCTTGTTCCTTGTGAAAGAAGTTACAGACTACTTTCATGGTGATGCGGCAAAGGAAGAGGCGCACCCTTTTAGAATTTTTATGATTGTGAGAGACTTTCTAAATAGTTTGGATCAAGTGTGTAAAGAAGTGGGAAGGATGCAGGATAGAACTGTGGTTGGTTCAGCTAGATCCTTCAGGATAGCCGCAAGTGCATCATTACCTGTTCTCAACAGGTACCATGCAAGACAAGATAGAAGTTCAGACGAGGAAAGCTTATCCCCCTAG 2640 0.4917 MKPHHHHFTFFFILSSFSLLPTSRATNTTQFSIFNETRRILHQPLFPELSAPPPLTPPPPPPPDIPSSPDIPFFNEYPAGQPPPAQNLPPATSSGAVIANPTATQPTKPAKKVAIAISVGIVTLGMFSALGFFLYRHRAKHPVETQKLVSRRLPEDSPRAPPPSSFLYIGTVEPARTSLTEPNGTNIITSPYRKLDSIKLNSDHRYRPSPELQPLPPPQKPPDESHSPPAGFSDSSSSSEEESCETAFHSPHGSSLSREENCFTPVSRHSFLAAAIPAAGAAAPVVPYSKRTSPKSRFSAPSPDIRNMVVPPAKHSPPPALAPPASTEYEQIEKVTTLGPSRRPKFSSPPPAPNLTHLIKPAAPPPPPPPPPPPSFPSSRKGWSPSISASSSSVSRKQRESWSPNGGVSSANSASLRKGSTEEVDKRNAGDDVDGAKPKLKALHWDKVCATSDRTTVWDQLKSSSFQLNEDMMETLFGCKSSGSAFKETVTRRSVLPPVELENRVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGTELLETLVKMALTKEEEIKLKNYDGDLSRLGSAERFLKAVLDIPLAFKRIEAMLYRANFETEVNYLRKSFQTLEAASEELKHSRLFLKLLEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTDGESANENVQNQTTSQFNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLRSYVSKLESGLDKVSLVLQCRKPDMYGNFFNSTGLFLKDAEEEIVRIKADERKALFLVKEVTDYFHGDAAKEEAHPFRIFMIVRDFLNSLDQVCKEVGRMQDRTVVGSARSFRIAASASLPVLNRYHARQDRSSDEESLSP 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03932 879 SMART it6_source 430 843 IPR015425 -
Viun3g03932 879 MobiDBLite consensus disorder prediction 203 259 - -
Viun3g03932 879 MobiDBLite consensus disorder prediction 280 436 - -
Viun3g03932 879 MobiDBLite consensus disorder prediction 47 69 - -
Viun3g03932 879 ProSiteProfiles Formin homology-2 (FH2) domain profile. 430 854 IPR015425 -
Viun3g03932 879 MobiDBLite consensus disorder prediction 210 225 - -
Viun3g03932 879 MobiDBLite consensus disorder prediction 47 105 - -
Viun3g03932 879 MobiDBLite consensus disorder prediction 380 418 - -
Viun3g03932 879 Pfam Formin Homology 2 Domain 435 828 IPR015425 -
Viun3g03932 879 Gene3D Formin, FH2 domain 432 840 IPR042201 -
Viun3g03932 879 SUPERFAMILY Formin homology 2 domain (FH2 domain) 364 841 - -
Viun3g03932 879 MobiDBLite consensus disorder prediction 344 379 - -
Viun3g03932 879 MobiDBLite consensus disorder prediction 90 105 - -
Viun3g03932 879 PANTHER FORMIN-RELATED 11 873 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Viun3g03932 879 MobiDBLite consensus disorder prediction 229 259 - -
Viun3g03932 879 MobiDBLite consensus disorder prediction 419 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03932 Viun-Chr3 46815127 46820376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03932 384 869 FH2 protein (formin) Gene Family AT5G67470 69.512 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03932 - - gmx:100803578 1308.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03932 3 46815127 46820376 Viun3g03932 3 46815127 46820376 ECH
Viun2g02197 2 29803689 29809397 Viun3g03932 3 46815127 46820376 PCT