Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03926 ATGAGGGGAGAGGAGTTAGCGTTTGCAGTTGCTCCAACCATGGTGGTGGTGACTGTGAGAGAGTTCGACCCAGATAAAGACACAGAGAGAGTGGAAGCCGTTGAAAGATTATGTGAGGTTGGACCCAGTGGGAAGCTTTCCCTCCTCACCGACCTCCACGGTGACCCTATTTGCAGGGTCCGCAACTCACCTACTTTCCTAATGCTGGTAGCCGAAATTGGTCAAGAGACAGTGGGAATGATAAGGGGTTGCATCAAAACCGTTACATGTGGAAAGAAGCTCCAGAGGCACGGAAAGAACACCACCGAACCTGCTTCCAAACAAGTCCCTGTCTACACCAAACTCGCCTACATATTGGGCCTCCGGGTTTCTCCTCATCACAGGAGAATGGGAATAGGGTTGAAGCTGGTGCAGAGATTGGAGGAGTGGTTCAGAGAGAATGGAGCAGAGTACGCTTACATGGCAACAGAAAAGGACAACGTGGCATCCGTTAAGCTCTTTACCGACAAATGCGGCTACTCAAAGTTTCGTACCCCGTCCATCCTCGTCAACCCCGTTTTTGCTCACTCACTCACACCCTCCCCCAACGTCACCATCATACAACTTGCCCCAAACGACGCCGAGTTCCTCTACCGCACCAAGTTCGCCACCACCGAGTTCTTCCCCCGCGACGTCGACTCCGTCCTCAACAACAACCTAACTCTCGGCACCTTCCTCGCCGTTCCCCGCGGCTCATTCTCCCCCGACACGTGGCCGGGTTCGCCCCTCTTTCTCGCGGACCCACCCTCCTCCTGGGCCCTCCTCAGCGTGTGGAACTGCAAGGACGTGTTCACACTCCAGGTGAGGGGCGCGTCGCGTGTGAAGAAGGCCCTCGCCAAGACCACTCGCCTCCTCGACCGCGCCTTCCCCTGGCTGCGCCTGCCCTCCATCCCTAACCTCTTCCAGCCATTTGGGTTTCACTTTTTGTACGGGCTCGGAGGGGAGGGCCCACGGGCCCAGAAGATGGTGAGTGCTTTGTGCGCCTTCGCCCACAACCTCGCCAAGGATAGTGGGTGCCAGGTGGTGGCCACGGAGGTTTCAGGGCAGGAACCCCTACGCTGCGCCATCCCACACTGGAAGATGCTCTCTTGCGAAGAGGATTTGTGGTGCATCAAGAGACTCGGGGAAGATTACAGCGATGGTGCTGTTGGTGATTGGACCAAATCCCCTCCCGGATTCTCAATTTTTGTTGATCCCAGAGAGTTCTAA 1248 0.5617 MRGEELAFAVAPTMVVVTVREFDPDKDTERVEAVERLCEVGPSGKLSLLTDLHGDPICRVRNSPTFLMLVAEIGQETVGMIRGCIKTVTCGKKLQRHGKNTTEPASKQVPVYTKLAYILGLRVSPHHRRMGIGLKLVQRLEEWFRENGAEYAYMATEKDNVASVKLFTDKCGYSKFRTPSILVNPVFAHSLTPSPNVTIIQLAPNDAEFLYRTKFATTEFFPRDVDSVLNNNLTLGTFLAVPRGSFSPDTWPGSPLFLADPPSSWALLSVWNCKDVFTLQVRGASRVKKALAKTTRLLDRAFPWLRLPSIPNLFQPFGFHFLYGLGGEGPRAQKMVSALCAFAHNLAKDSGCQVVATEVSGQEPLRCAIPHWKMLSCEEDLWCIKRLGEDYSDGAVGDWTKSPPGFSIFVDPREF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03926 415 FunFam Probable N-acetyltransferase HLS1-like 26 180 - -
Viun3g03926 415 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 49 175 IPR016181 -
Viun3g03926 415 CDD NAT_SF 68 153 - -
Viun3g03926 415 Gene3D - 50 179 - -
Viun3g03926 415 Pfam Acetyltransferase (GNAT) family 62 173 IPR000182 GO:0016747
Viun3g03926 415 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 16 415 - -
Viun3g03926 415 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 17 192 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03926 Viun-Chr3 46769672 46771887 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun3g03926 Acetyltransf_1 9.1e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03926 - - gmx:100804109 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03926 3 46769672 46771887 Viun3g03926 3 46769672 46771887 ECH
Viun2g02195 2 29780450 29782472 Viun3g03926 3 46769672 46771887 PCT