Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03882 ATGGAGATTCCTAAGCTCCAAATAATTCAACACTCTCGCTGTATACCACTTCTTTTCCTTCTTCAGCTCTTATCACTGCAGTTCTCCTCACTCGGCTACAACGTCCCAGATAACTACTTCATCAATTGTGGGTCAGGCAACAGTGTTACTGATAGTGGCAAGGCTTACGTTGCTGAATCAACCCTTCAAACCAGTTTTAACAGCAGTAACACAGAAACGAATCAGTCATCGGTGCCTTCTCCTCTTTACCAAACAGCAAGGATTTTTCGAAGTGATTCTTGGTATAAGTTCAACATCGATACAAATGGCACCTACCTGGTACGCCTCCATTTCTTCCCTTTCTCTTCCCCGAGTAATCTTTCCTCTGCCAGATTCAACGTTTCAGTTCCTGGCTTCTGGTTGTTGCAAAACTTTAATGGTAGAAATGACAGCAATAACAACTCTGCTTTAGTAAAAGAGTTTTTCATGGAAATCAGTACCCCCAGTATCAAAATAACTTTCAGACCTCTGGAATCATCGTTTGCGTTTGTGAATGCCATAGAACTGTTCGTACTACCCCTCCATCTCATATCCAACAAAGTGGCGCGTTTCGCTCCAATTGGAGGTACATCTCCCCTCAACGGAGGTTTGTACTCTCGGGTGTTGGAGACCAAACACAGACTTAATGTTGGTGGCGAAACTACCAAAGATATTCTATTGAGAAACTGGATTCCTGATGATATATATCTCACTTATCCGGAAAACGCCAAGAATCGTTCCCCTTACCAGGGTCAAATCGTGCCCCGTGTAGGTGATGACGCCGATGGTCCAAACGCAACTAGTTATACTGCGCCATCCGAGGTGTACGGAACTGCTAAGGAGACTAGAAACATCTCTTCCACTGACGGAGACCTTGGACTTTTCAACATAACATGGGCTCTTCCGGTGGACAACAGCACAGATCATTTCCTTAGGCTTCATTTCTGTGACTATGTCAGTTCACAAGTTGGCCTAACATATTTCGATCTTTCCATTTATGACGCTCATGTCATACAGGTAAATAATGACGGAAACGTGTCTAACGAGTTGCCTGCCCCTTATTATTATGATTTCGTGGTGAAATCTGATAACTCTGGACATATTAAGGTCAGCCTAACACCAAATGGAACCGCTGACATAAAGGATGCATTTTTAAACGGGCTAGAAATAATGAAAGTGATTGAATCATCAAATTCTGTCCCTCCTGACTTGGTGGAACCCGGTTCCAAGCATAATCGTCTTCCTGTGTTGCTGGGTTCAGTTCTCGGTGGTTTAGTATTGGTATTTGTTGTGGTGCTACTTGGCTTTCTTTGGCGTTCTAAAATGAGGAAGGAAAAGCCCGTTGAGAATTCGGACTGGTTGCCAATCCCCGTTAATGCTGGAGGGAGTTCTCACAGCAGATTGACTGATATAACCAGTCACGGTTCTCCCCTTCCCAACATAAACCTAGGTCTCAAAATACCCTTGATTGATCTTCAACTGGCAACAAAGAACTTCCACGCAAGTCAGTTAATTGGCAAGGGTGGTTTTGGCAACGTCTACAAGGGAGTCCTCAAGAATGGCATGACAGTGGCTGTGAAAAGAAGCCAGCCAGGGTCAGGTCAAGGCCTTCCAGAATTTCAGACAGAGATCATGGTTTTGTCTAAGATTCGCCACAAGCACCTTGTTTCCTTAATTGGATATTGTGATGAGAGGTTCGAGATGATTCTGGTGTATGAATATATGGAAAAAGGGACACTCAGGGACCATTTGTATAATACAAAGTTGCCAAGCTTGTCCTGGAAGGTGAGGCTTCAAATTTGCATTGATTCTGCGAGGGGTCTTCATTACCTTCACAAAGGAGCAGCTGGGGGAATCATTCACCGTGACGTAAAGTCCACAAACATATTGCTTGATGAGAACCATGTTGCTAAAGTTGCTGATTTTGGTCTTTCAAGGTCAGGTCCTCCTGATACTCAACCTCATGTCACCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTCAGGTCGCAACAGCTGACAGAAAAATCTGATGTCTATTCATTTGGAGTAGTTCTTTTGGAAGTGTTGTGTGCAAGAGCAGTGATTGACCCAACTCTTCCAAGAGATCAGATAAACTTGGCAGAATGGGGATTGCTTTGCAAAACCAAGGGGATACTCCAAGAGATCATCGATCCTTCCATCAAGTACCAAATTGATCAAAACTCACTCAGAAAATTTAGTGAGACGATAGAAAAATGCTTGCAAGAAGATGGTTCTGATAGGCCAACCATGGGCGATGTGTTGTGGGACTTGGAGTATGCGCTGCAGCTTCAGAAAGGTGCAAATGCAATTCAGACAGACCCGTATGAGGATAGTTCAAGTAGTGTTTCTGCATCACTTCAACTGCCCAATGTTCGGCGTCTTCCTTCACTCTCCACACTGAGTGAAGCGGATGATACCATTGTGAGGGGTGATGAATCCGATAGTGTTGTGGATTCCGTTTTCTCCCAGTTGAAGATTGATGATGCCAGATAG 2547 0.4397 MEIPKLQIIQHSRCIPLLFLLQLLSLQFSSLGYNVPDNYFINCGSGNSVTDSGKAYVAESTLQTSFNSSNTETNQSSVPSPLYQTARIFRSDSWYKFNIDTNGTYLVRLHFFPFSSPSNLSSARFNVSVPGFWLLQNFNGRNDSNNNSALVKEFFMEISTPSIKITFRPLESSFAFVNAIELFVLPLHLISNKVARFAPIGGTSPLNGGLYSRVLETKHRLNVGGETTKDILLRNWIPDDIYLTYPENAKNRSPYQGQIVPRVGDDADGPNATSYTAPSEVYGTAKETRNISSTDGDLGLFNITWALPVDNSTDHFLRLHFCDYVSSQVGLTYFDLSIYDAHVIQVNNDGNVSNELPAPYYYDFVVKSDNSGHIKVSLTPNGTADIKDAFLNGLEIMKVIESSNSVPPDLVEPGSKHNRLPVLLGSVLGGLVLVFVVVLLGFLWRSKMRKEKPVENSDWLPIPVNAGGSSHSRLTDITSHGSPLPNINLGLKIPLIDLQLATKNFHASQLIGKGGFGNVYKGVLKNGMTVAVKRSQPGSGQGLPEFQTEIMVLSKIRHKHLVSLIGYCDERFEMILVYEYMEKGTLRDHLYNTKLPSLSWKVRLQICIDSARGLHYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSRSGPPDTQPHVTTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARAVIDPTLPRDQINLAEWGLLCKTKGILQEIIDPSIKYQIDQNSLRKFSETIEKCLQEDGSDRPTMGDVLWDLEYALQLQKGANAIQTDPYEDSSSSVSASLQLPNVRRLPSLSTLSEADDTIVRGDESDSVVDSVFSQLKIDDAR 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03882 848 FunFam receptor-like protein kinase FERONIA 470 580 - -
Viun3g03882 848 FunFam Putative receptor-like protein kinase 213 400 - -
Viun3g03882 848 SMART serkin_6 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03882 848 Pfam Malectin-like domain 41 399 IPR024788 -
Viun3g03882 848 SUPERFAMILY Protein kinase-like (PK-like) 493 773 IPR011009 -
Viun3g03882 848 ProSiteProfiles Protein kinase domain profile. 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03882 848 CDD STKc_IRAK 511 776 - -
Viun3g03882 848 Gene3D - 38 184 - -
Viun3g03882 848 Gene3D - 215 400 - -
Viun3g03882 848 Gene3D Transferase(Phosphotransferase) domain 1 581 799 - -
Viun3g03882 848 FunFam Receptor-like protein kinase FERONIA 581 798 - -
Viun3g03882 848 Pfam Protein tyrosine and serine/threonine kinase 507 772 IPR001245 GO:0004672|GO:0006468
Viun3g03882 848 FunFam Putative receptor-like protein kinase 38 186 - -
Viun3g03882 848 PANTHER OS07G0166700 PROTEIN 492 782 IPR045272 GO:0004714|GO:0006468
Viun3g03882 848 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Viun3g03882 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Viun3g03882 848 Gene3D Phosphorylase Kinase; domain 1 473 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03882 Viun-Chr3 46263595 46266662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03882 15 848 Receptor kinase-like Gene Family AT2G23200 45.210 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun3g03882 Malectin_like 1.1e-27 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03882 - - gmx:100789555 1124