Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun3g03875 | ATGACTCTCTTCTGTCAACCTCTCATAATCTCACTGCTTCTTCTCCTCGCTGTTAACCACTGTTCTGGACTCACTAGAGACGGCGTTCTCTTGCTTTCTTTCAAGTACGCTGTGCTCAACGACCCTCTTTACGTCCTCGCAAACTGGAACTACACTGACCAGACACCGTGTTCGTGGAACGGCGTTTCTTGTTCCACCGTACCAGCCACCAACGGTACCGAGTACCGCGTCACATCCTTGTCGCTTCCCAATTCTCAGCTTTTCGGTTCGATTCCCTCCGATCTGGGTTCCATTGAACATCTTCAAGTTCTGGACCTTTCCAACAACTCCCTCAACGGCTCTCTTCCCTCTTCGCTGTCCCAATCCTCCCAGCTTAGGTTCCTCAATCTCTCTAACAATTTAATATCTGGGGAGGTTCCGGAGTCCATCACCCAGCTTCAGAATCTCCAATGCCTAAACCTCTCCGACAATGCTTTGGCGGGAAAACTGCCTCACGATTTGTCCAACATGCACAACCTAACTCTCGCTTCCTTCAAGAACAACTACTTGGTTGGTTTTCTTCCCAGCGGCTTGAGAACGTTGCAGGTTTTGGATCTGTCTTCAAACCTTTTCAACGGGACTCTTCCCGCGGATTTCGGCGGAGACGCCATGCGTTACCTAAACATCTCCTACAACAGATTTTTCGGTGAAATCCCGAAGGAGTTCGCAGCAAACATTCCGGGGAACGCCACCGTCGACCTCTCGTTCAACAACCTCACAGGCCAAGTTCCCGAATCCGCCGTGTTTTTGAATCAGAACTGGAAATCGTTCTCCGGTAACGTCAACCTGTGTGGAGAACAGACGAAGAATGTGTGCCCTGTTCCTTCTTCGTCGTCCTCCAACCCGAAAGTTTCTGCTCCTATATCTCCTCCAGCAATCGCGGCAATCCCGCGGACCTTTGATTCTTCGGCAGCGCCGAAGGGGAAAAAAGGGAGTGGTCTGAAACGAGGAACGATTATAGGAATCGTTGTGGGAGACGTAATTGGGATAGCGATTCTGGGCATGATATTCGCGCAGGTGTATCGGTTGAAGAAAAAGAAGGAGGTGGTGAAGAAGGAGGCGGTTGTGAGGAGTGGGAGTGGCAGTGAGAGTGAGAGTTCGTGGGAGTCTAGAAGGTTTATGAGGTGGTCGTGTTTGAGTAAGAGAGCGGAAGAGGAAGAGTGTTCGGAGACAAGAAGCAGTTGTGATAGCGAGGTGGAGGGGCAGAAGCAGAAGGGTCCTCAACAGGAGGAGAAAACGGGGACTCTTGTGATCGTGGACGGTGAACGACAGCTTGAACTGGAAACGCTGCTGAAGGCTTCTGTGTACATATTGGGTGCGACAGGGTCCAGCATAATGTACAAGGCTGTCTTGGAAGATGGTATGTCCTTGGCGGTTCGGAGAATCGGGGAGAGCGGTGTGGAGCGGTTCAAGGACTTCCAGAACCAGGTTCGACTTATTGCTAAACTGGTGCACCCTAATCTGGTTCGCATTCGAGGCTTCTACTGGGGACACGATGAGAAGCTCATCATCTATGATTTCGTTCCAAACGGTTGTCTTGCCAATGTTCGTTACAGGAAGGTGGGCACCTCGCCGACTCATTTACCGTGGGAAATCAGGTTGAAGATAGCGAAAGGGGTGGCACGTGGGCTCACTTATCTCCACGAGAAGAAACACGTGCATGGAAACTTGAAGCCTAGCAATATTCTGCTGGGCAATGACATGGAGCCCAAGATTGGAGACTTTGGGCTTGAGAGAATAGTCACCGGTGACACCAGTTATAAGGCTGGCGGATCGGCGCGTATTTTTGGGAGCAAGAGATCCACGGCCTCGCGGGACAGTTTTCAGGACATTACCTATGGGCCAAGCCCGAGCCCGAGCCCGAGCCCTAGCTCCATGATGGGCTTATCTCCTTACCATGCTCCTGAGTCGCTGAGGAACCTGAAGCCTCACCCCAAGTGGGACGTGTACTCTTTTGGGGTAATGTTTCTTGAGCTTCTAACGGGGAAGATTGTGGTCTTGGATGATATGGGCCAAGGGCCTGGGGTTTTGACGGAGGATAAGAACCGGGCCTTGCGTATGGTTGACATGGCTATCAGGGCCGACATGGAGGGTAGAGAGGAGGCCCTGTTGGCCTACTTCAAGCTAGGGTATAGTTGTGTGTCTAGCGTTCCACTGAAAAGGCCTTCTATGAAAGAGGTGCTACAAGTTCTTGAAAAGATCTCATCCTCCTCTTCTTCTTCCTCATATTACTATAGCGTCTAA | 2283 | 0.5112 | MTLFCQPLIISLLLLLAVNHCSGLTRDGVLLLSFKYAVLNDPLYVLANWNYTDQTPCSWNGVSCSTVPATNGTEYRVTSLSLPNSQLFGSIPSDLGSIEHLQVLDLSNNSLNGSLPSSLSQSSQLRFLNLSNNLISGEVPESITQLQNLQCLNLSDNALAGKLPHDLSNMHNLTLASFKNNYLVGFLPSGLRTLQVLDLSSNLFNGTLPADFGGDAMRYLNISYNRFFGEIPKEFAANIPGNATVDLSFNNLTGQVPESAVFLNQNWKSFSGNVNLCGEQTKNVCPVPSSSSSNPKVSAPISPPAIAAIPRTFDSSAAPKGKKGSGLKRGTIIGIVVGDVIGIAILGMIFAQVYRLKKKKEVVKKEAVVRSGSGSESESSWESRRFMRWSCLSKRAEEEECSETRSSCDSEVEGQKQKGPQQEEKTGTLVIVDGERQLELETLLKASVYILGATGSSIMYKAVLEDGMSLAVRRIGESGVERFKDFQNQVRLIAKLVHPNLVRIRGFYWGHDEKLIIYDFVPNGCLANVRYRKVGTSPTHLPWEIRLKIAKGVARGLTYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDITYGPSPSPSPSPSSMMGLSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDMGQGPGVLTEDKNRALRMVDMAIRADMEGREEALLAYFKLGYSCVSSVPLKRPSMKEVLQVLEKISSSSSSSSYYYSV | 760 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun3g03875 | 760 | Pfam | Leucine Rich Repeat | 100 | 120 | IPR001611 | GO:0005515 | |
Viun3g03875 | 760 | Gene3D | Ribonuclease Inhibitor | 25 | 190 | IPR032675 | - | |
Viun3g03875 | 760 | Gene3D | Ribonuclease Inhibitor | 191 | 287 | IPR032675 | - | |
Viun3g03875 | 760 | Gene3D | Phosphorylase Kinase; domain 1 | 412 | 520 | - | - | |
Viun3g03875 | 760 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 24 | 192 | - | - | |
Viun3g03875 | 760 | FunFam | Leucine-rich repeat receptor-like protein kinase | 193 | 287 | - | - | |
Viun3g03875 | 760 | MobiDBLite | consensus disorder prediction | 611 | 644 | - | - | |
Viun3g03875 | 760 | FunFam | Os07g0541700 protein | 526 | 611 | - | - | |
Viun3g03875 | 760 | SUPERFAMILY | L domain-like | 27 | 278 | - | - | |
Viun3g03875 | 760 | SMART | LRR_typ_2 | 191 | 214 | IPR003591 | - | |
Viun3g03875 | 760 | SMART | LRR_typ_2 | 146 | 170 | IPR003591 | - | |
Viun3g03875 | 760 | SMART | LRR_typ_2 | 98 | 122 | IPR003591 | - | |
Viun3g03875 | 760 | Pfam | Leucine rich repeat N-terminal domain | 27 | 65 | IPR013210 | - | |
Viun3g03875 | 760 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 168 | 752 | IPR046959 | - | |
Viun3g03875 | 760 | MobiDBLite | consensus disorder prediction | 400 | 420 | - | - | |
Viun3g03875 | 760 | CDD | STKc_IRAK | 451 | 747 | - | - | |
Viun3g03875 | 760 | SUPERFAMILY | Protein kinase-like (PK-like) | 450 | 748 | IPR011009 | - | |
Viun3g03875 | 760 | MobiDBLite | consensus disorder prediction | 400 | 426 | - | - | |
Viun3g03875 | 760 | Pfam | Protein kinase domain | 451 | 742 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun3g03875 | 760 | PRINTS | Leucine-rich repeat signature | 146 | 159 | - | - | |
Viun3g03875 | 760 | PRINTS | Leucine-rich repeat signature | 101 | 114 | - | - | |
Viun3g03875 | 760 | Gene3D | Transferase(Phosphotransferase) domain 1 | 522 | 757 | - | - | |
Viun3g03875 | 760 | ProSiteProfiles | Protein kinase domain profile. | 445 | 747 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun3g03875 | 760 | MobiDBLite | consensus disorder prediction | 611 | 628 | - | - | |
Viun3g03875 | 760 | ProSiteProfiles | Leucine-rich repeat profile. | 100 | 122 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun3g03875 | Viun-Chr3 | 46136043 | 46138967 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun3g03875 | 10 | 758 | Receptor kinase-like Gene Family | AT4G37250 | 56.921 | 0.0 | 805 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Viun3g03875 | Pkinase | 6.7e-31 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun3g03875 | - | - | pvu:PHAVU_003G240400g | 1226.85 |