Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03859 ATGCACAAGCTCCATTCTGTTTCTACCACCAATGACTCTTCAGATGAGGATATGGGTGAAGAATACCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGTTCTGATGGCCTTCGTTTGAAAGAAGGAATACACATCAACAAAGGTCTTCTTGCTCTTGGTAATGTCATAAGTGCACTAGGTGATGAGAAAAAGCGAAAGGAAGGTGTGCATGTTCCTTATCGTGATAGCAAACTCACTCGACTCTTACAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATAAGTCCTGCTGATGTCAATGCCGAGGAAACTCTTAACACTCTCAAATATGCAAACCGTGCACGCAATATTCAAAATAAGCCTGTTGTTAATCGAGATTTAATATCCAATGAGATGCAGCAAATGCGCCAACAGTTGAAGTACTTGCAGGCTGAACTCTGTTCTCGGGGAGCAGCTCCCTCTGATGAAGTGCGGGTTCTTAAGGAAAGGATTGCTTGGCTTGAGGCTACTAATGAATATCTTTACAGAGAACTTCATGAATATCGCAGTAGATGTGCTTTTGTAGAGAGATGTGAAATCGATGAACCAGCAGATAGAAACATTTATCTCATGAAAGCTGATGGGCTTGAGAGGCGCTTTCAGAGCTTAGATTCATCTGACCATCCCATGGTTGGAAGTATATCTGGTGAAGATTCAAGGGAAACTGACGAAGAAGAAAAAGAGTTGGAACATGTGCTATTACAAAATACCATGGATAAAGAGATGAATGAGTTGAATAAGCGGTTGGAGCAGAAAGAGTCTGAGATGAAGCTCATTGGAGTTGATACTGAGGCACTCAAACAACATTTCGGGAAGAAAATTGTGGAACTTGAGGAGGAGAAAAGAAAAGTACAGGAAGAGAGGGACAGATTATGGCATGAGGTAGAGAATCTTGCTACTAATTCAGATGGGCTAGCACACAAAACCCAAGATGTTCGTGGCCAAAAGTTGAAAGCATTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAGCCAGGTGCAACTCTTAAAGCAAAAAGAGAAGAGTGAAGAAGCTGCAAAAAGACTGCAGGCTGAGATACAGTATATCAAGGCTCAGAAGGTTCAGTTGCAGCATAAAATGAAACAAGAGGCTGAACAATTTCGACAATGGAAGGCCTCTCGTGAGAAGGAGCTGCTCCAGTTGAAAAAGGAGGGAAGAAAGAATGAATACGAAAGACATAAACTTGAGGCTCTAAACCATCGCCAAAAAATGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACAAAAAGGCTAAAAGAACTGTTGGAAGCCCGTAAATCGTCTCCTCGTGACAACTCTGTTTATTCAAATGGACATCTACATCCCGGGCTGGTCAATGAAAAATCCCTCCAGAAGTGGCTTGATCAGGAGGTAGAGGTCATGGTTCACGTGCATGAAGTTCGTGCTGAATTTGACAAACAAAATCAAGTCCAAGCTGCACTGGAAGAAGAGTTGGCTTTACTAAAGCAGGATCAGTTTTCAGATGAGCTGAGTGTTCCGAAAGGAAAGAGCAAATATTTGAGGTTGTTATCCATGTCGCCAGATGCAAAAGTTGAGAGAATAGCTTCTCTTGAGAACATGCTGTGCATGTCTTCAGTTGCTTTGAAAGCCATGGCTTCACAACTTACTGAAGCAGAAGAAAGGGAACGCACGCTAAACAACCGTGGTCGTTGGAATCAGCTACGCTCAATGGGAGATGCAAAGAATGTGCTTCAGTATTTGTTCAGTGCTACTGCTGAAGCAAGGTGCCAACTGTTGGCAAAGAATATGGAACTTAATGATTTGAAAGAGCAACTAAATGAGCTTGTAGCACTATTACAACAAAGTGAAGCACGAAGAAAAGAACTTGTAAAGGAGGAAAAAATAAGGGAACAAGCTGTTGCCATCACATTGAATACACCAGCATTGGAAAATTCACGGTCGTTGAAACACCTTGCTGATGAAATGAGTGATCCGTTGTCTCCAATGTCACTTCCTGCACCAAAGCAACTCAAATTCACACCTGGAGTTGTTAATTGGTCTGTCACGGAGTCGGCTACATTTTTAAACGAAGCACGAAAGATGATACCCATTGGGGAGCTGTCAACTAAGAGGCTAGCTGCTATGGGACAAGCCGGAAAACTTTGGAAGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATGGATCAAACACAGTGACGAGACCATTATGAGGTCAAGGCCTCGAGCACAAGCTTTAATTAACGTGATGTGA 2385 0.4256 MHKLHSVSTTNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGLRLKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADVNAEETLNTLKYANRARNIQNKPVVNRDLISNEMQQMRQQLKYLQAELCSRGAAPSDEVRVLKERIAWLEATNEYLYRELHEYRSRCAFVERCEIDEPADRNIYLMKADGLERRFQSLDSSDHPMVGSISGEDSRETDEEEKELEHVLLQNTMDKEMNELNKRLEQKESEMKLIGVDTEALKQHFGKKIVELEEEKRKVQEERDRLWHEVENLATNSDGLAHKTQDVRGQKLKALEAQILDLKKKQESQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRKNEYERHKLEALNHRQKMVLQRKTEEATMATKRLKELLEARKSSPRDNSVYSNGHLHPGLVNEKSLQKWLDQEVEVMVHVHEVRAEFDKQNQVQAALEEELALLKQDQFSDELSVPKGKSKYLRLLSMSPDAKVERIASLENMLCMSSVALKAMASQLTEAEERERTLNNRGRWNQLRSMGDAKNVLQYLFSATAEARCQLLAKNMELNDLKEQLNELVALLQQSEARRKELVKEEKIREQAVAITLNTPALENSRSLKHLADEMSDPLSPMSLPAPKQLKFTPGVVNWSVTESATFLNEARKMIPIGELSTKRLAAMGQAGKLWKWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRSRPRAQALINVM 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03859 794 SMART kinesin_4 1 138 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g03859 794 Pfam Kinesin motor domain 6 130 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g03859 794 Coils Coil 293 320 - -
Viun3g03859 794 Coils Coil 261 288 - -
Viun3g03859 794 MobiDBLite consensus disorder prediction 230 249 - -
Viun3g03859 794 Coils Coil 572 592 - -
Viun3g03859 794 Coils Coil 501 528 - -
Viun3g03859 794 Coils Coil 441 461 - -
Viun3g03859 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 161 IPR027417 -
Viun3g03859 794 Coils Coil 343 394 - -
Viun3g03859 794 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 12 783 IPR027640 GO:0003777|GO:0007018
Viun3g03859 794 Gene3D Kinesin motor domain 2 170 IPR036961 -
Viun3g03859 794 Coils Coil 622 656 - -
Viun3g03859 794 PRINTS Kinesin heavy chain signature 80 101 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g03859 794 PRINTS Kinesin heavy chain signature 26 44 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g03859 794 Coils Coil 138 158 - -
Viun3g03859 794 ProSiteProfiles Kinesin motor domain profile. 1 130 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g03859 794 ProSitePatterns Kinesin motor domain signature. 25 36 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03859 Viun-Chr3 45851096 45861150 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03859 25 163 Calmodulin-binding Proteins AT5G65930 46.763 1.46e-29 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03859 - - gmx:100790341 1377.46