Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03858 ATGGGAACTGGCTATAATGACAATTGTCGGATCGGATTAATTCCTCAGGTTATGAATGCCTTATTCAACAAAGTTGAAACACTAAAGCATCAAACAGAATTTCAGTTGCGAGTCTCCTTCATTGAGATTTTAAAGGAAGAGGTCAGGGACCTGTTGGATACGGTATCTTTGGGCAAATCAGACACCTCCAACTCTAATGGCCATTCTGGAAAAATAACTGTTCCTGGGAAGTCACCAATACAAATTCGTGAAACAGCAAATGGAATAATAACACTGGCAGGAATAACTGAAATTTCTGTAAGTACATTACATGAGATGTCTGCATACTTGGAACAGGGTTCTTTAAGTAGGGCAACGGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCCATTTTCACAATTACATTAGAACAAATGCACAAGCTCCATTCTGTTTCTACCACCAATGACTCTTCAGATGAGGATATGGGTGAAGAATACCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGTTCTGATGGCCTTCGTTTGAAAGAAGGAATACACATCAACAAAGGTCTTCTTGCTCTTGGTAATGTCATAAGTGCACTAGGTGATGAGAAAAAGCGAAAGGAAGGTGTGCATGTTCCTTATCGTGATAGCAAACTCACTCGACTCTTACAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATAAGTCCTGCTGATGTCAATGCCGAGGAAACTCTTAACACTCTCAAATATGCAAACCGTGCACGCAATATTCAAAATAAGCCTGTTGTTAATCGAGATTTAATATCCAATGAGATGCAGCAAATGCGCCAACAGTTGAAGTACTTGCAGGCTGAACTCTGTTCTCGGGGAGCAGCTCCCTCTGATGAAGTGCGGGTTCTTAAGGAAAGGATTGCTTGGCTTGAGGCTACTAATGAATATCTTTACAGAGAACTTCATGAATATCGCAGTAGATGTGCTTTTGTAGAGAGATGTGAAATCGATGAACCAGCAGATAGAAACATTTATCTCATGAAAGCTGATGGGCTTGAGAGGCGCTTTCAGAGCTTAGATTCATCTGACCATCCCATGGTTGGAAGTATATCTGGTGAAGATTCAAGGGAAACTGACGAAGAAGAAAAAGAGTTGGAACATGTGCTATTACAAAATACCATGGATAAAGAGATGAATGAGTTGAATAAGCGGTTGGAGCAGAAAGAGTCTGAGATGAAGCTCATTGGAGTTGATACTGAGGCACTCAAACAACATTTCGGGAAGAAAATTGTGGAACTTGAGGAGGAGAAAAGAAAAGTACAGGAAGAGAGGGACAGATTATGGCATGAGGTAGAGAATCTTGCTACTAATTCAGATGGGCTAGCACACAAAACCCAAGATGTTCGTGGCCAAAAGTTGAAAGCATTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAGCCAGGTGCAACTCTTAAAGCAAAAAGAGAAGAGTGAAGAAGCTGCAAAAAGACTGCAGGCTGAGATACAGTATATCAAGGCTCAGAAGGTTCAGTTGCAGCATAAAATGAAACAAGAGGCTGAACAATTTCGACAATGGAAGGCCTCTCGTGAGAAGGAGCTGCTCCAGTTGAAAAAGGAGGGAAGAAAGAATGAATACGAAAGACATAAACTTGAGGCTCTAAACCATCGCCAAAAAATGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACAAAAAGGCTAAAAGAACTGTTGGAAGCCCGTAAATCGTCTCCTCGTGACAACTCTGTTTATTCAAATGGACATCTACATCCCGGGCTGGTCAATGAAAAATCCCTCCAGAAGTGGCTTGATCAGGAGGTAGAGGTCATGGTTCACGTGCATGAAGTTCGTGCTGAATTTGACAAACAAAATCAAGTCCAAGCTGCACTGGAAGAAGAGTTGGCTTTACTAAAGCAGGATCAGTTTTCAGATGAGCTGAGTGTTCCGAAAGGAAAGAGCAAATATTTGAGGTTGTTATCCATGTCGCCAGATGCAAAAGTTGAGAGAATAGCTTCTCTTGAGAACATGCTGTGCATGTCTTCAGTTGCTTTGAAAGCCATGGCTTCACAACTTACTGAAGCAGAAGAAAGGGAACGCACGCTAAACAACCGTGGTCGTTGGAATCAGCTACGCTCAATGGGAGATGCAAAGAATGTGCTTCAGTATTTGTTCAGTGCTACTGCTGAAGCAAGGTGCCAACTGTTGGCAAAGAATATGGAACTTAATGATTTGAAAGAGCAACTAAATGAGCTTGTAGCACTATTACAACAAAGTGAAGCACGAAGAAAAGAACTTGTAAAGGAGGAAAAAATAAGGGAACAAGCTGTTGCCATCACATTGAATACACCAGCATTGGAAAATTCACGGTCGTTGAAACACCTTGCTGATGAAATGAGTGATCCGTTGTCTCCAATGTCACTTCCTGCACCAAAGCAACTCAAATTCACACCTGGAGTTGTTAATTGGTCTGTCACGGAGTCGGCTACATTTTTAAACGAAGCACGAAAGATGATACCCATTGGGGAGCTGTCAACTAAGAGGCTAGCTGCTATGGGACAAGCCGGAAAACTTTGGAAGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATGGATCAAACACAGTGACGAGACCATTATGAGGTCAAGGCCTCGAGCACAAGCTTTAATTAACGTGATGTGA 2808 0.4206 MGTGYNDNCRIGLIPQVMNALFNKVETLKHQTEFQLRVSFIEILKEEVRDLLDTVSLGKSDTSNSNGHSGKITVPGKSPIQIRETANGIITLAGITEISVSTLHEMSAYLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMHKLHSVSTTNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGLRLKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADVNAEETLNTLKYANRARNIQNKPVVNRDLISNEMQQMRQQLKYLQAELCSRGAAPSDEVRVLKERIAWLEATNEYLYRELHEYRSRCAFVERCEIDEPADRNIYLMKADGLERRFQSLDSSDHPMVGSISGEDSRETDEEEKELEHVLLQNTMDKEMNELNKRLEQKESEMKLIGVDTEALKQHFGKKIVELEEEKRKVQEERDRLWHEVENLATNSDGLAHKTQDVRGQKLKALEAQILDLKKKQESQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRKNEYERHKLEALNHRQKMVLQRKTEEATMATKRLKELLEARKSSPRDNSVYSNGHLHPGLVNEKSLQKWLDQEVEVMVHVHEVRAEFDKQNQVQAALEEELALLKQDQFSDELSVPKGKSKYLRLLSMSPDAKVERIASLENMLCMSSVALKAMASQLTEAEERERTLNNRGRWNQLRSMGDAKNVLQYLFSATAEARCQLLAKNMELNDLKEQLNELVALLQQSEARRKELVKEEKIREQAVAITLNTPALENSRSLKHLADEMSDPLSPMSLPAPKQLKFTPGVVNWSVTESATFLNEARKMIPIGELSTKRLAAMGQAGKLWKWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRSRPRAQALINVM 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03858 935 Coils Coil 402 429 - -
Viun3g03858 935 MobiDBLite consensus disorder prediction 371 390 - -
Viun3g03858 935 Coils Coil 713 733 - -
Viun3g03858 935 Pfam Kinesin motor domain 8 271 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g03858 935 Coils Coil 434 461 - -
Viun3g03858 935 ProSitePatterns Kinesin motor domain signature. 166 177 IPR019821 GO:0003777|GO:0005524|GO:0007018
Viun3g03858 935 SMART kinesin_4 3 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g03858 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 302 IPR027417 -
Viun3g03858 935 Coils Coil 279 299 - -
Viun3g03858 935 ProSiteProfiles Kinesin motor domain profile. 1 271 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g03858 935 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 924 IPR027640 GO:0003777|GO:0007018
Viun3g03858 935 Coils Coil 763 797 - -
Viun3g03858 935 FunFam Kinesin-like protein 89 292 - -
Viun3g03858 935 Coils Coil 484 535 - -
Viun3g03858 935 Coils Coil 582 602 - -
Viun3g03858 935 PRINTS Kinesin heavy chain signature 122 139 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g03858 935 PRINTS Kinesin heavy chain signature 167 185 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g03858 935 PRINTS Kinesin heavy chain signature 221 242 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun3g03858 935 Gene3D Kinesin motor domain 1 311 IPR036961 -
Viun3g03858 935 Coils Coil 642 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03858 Viun-Chr3 45850132 45861150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03858 3 304 Calmodulin-binding Proteins AT5G65930 35.762 3.63e-44 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03858 - - gmx:100790341 1631.69