Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03840 ATGGAAAACGTTCGAGTCATCTCCACCACCACAATCAAAGCAACCGTTCCCAATAACGCTAACCCTCATAAACTCGATTTAACTCCCTGGGATCTCCAATTCCTCCCTACTGAAACCATCCAAAAAGGCCTTCTTTTTCGCAACGTAAAACACACCCCATTCCAAATCCACCACCTCCAACACTCCCTTTCCTCCACTCTAGCATTCTTTCCACTCCTCGCAGGTCGTCTCGCCATACTCCGACATCATCACACCATTGTCTCATCCCACATCGTATGCAACAACGCTGGAGCACTCTTTGTCCACGCGGCTGCACCCAACACCACCGTTGCTCACATCCTGCAACCAAAATACGTTCCTCTCATTGTTTCCTCCTTCTTCTCAATCAATGGAGTTAAAAACTACGAGGGCACGTCGCAGCCATTGCTGGCAGTGCAAGTGACGGAGCTAGTCGACGGCATCTTCATCGCCCTAACAGTGAACCACGTCGTTGCTGACGGCAAGTCTTTGTGGCATTTCGTGAATTCCTGGGCTGAAATCTCACGTGGCTCCCTTCAAATATCCAAACTCCCTTCTCTCTACCGTTACTTCCCCGATGGCATTGACCACCCCATACACTTTCCCTTCACAGAGGAAGAAGAAAACCAACACTCCCCAAACCCCAAACCACTAGCTCCACATGAGAGGGTATTCCATTTCACGAAGGAAAAAATCGCGGAACTCAAATCAAAAGCTAATGCAGAGGCCAACAGCGACAGAATATCTTCTCTGCAAGCGCTTCTAACTCTCGTTTGGCGTTCTGTGACACGTTGCAAGCGCGTGGAGCCGCAAGAAAACGTGCATTATGTGTTGTTCATTGGCGTTTGGTCGAGGATGGATCCACCACTGGCAGAGGGTTATTTTGGAAACTCAGTTATAGCCACTGTTGTGAGCATGAAAGCCGGGAAATTATTGGAGGGTGGGCTTGGAAAGGGGGCTTTAGAGATGAACAAGGTGATTTCTTTGCACTCTGGTGAGAAGGTAAAGAAGCACTATGAATGTTGGGTGAGAAGGCCAAGGCTTTTAACATTACCGAGTGGCGTGGGTGGTAGTAATTACTTGATCACTAGCAGTTCCCCAAGGTTTAAGATATTAGATAACGATTTTGGTTGGGGAAAGGCTGAAGCAGTTCGAATTGGAGGTGGACAACATAAACGTAACGGCATGATTACTGTGTTTGGCGGCGCTGAAGAAGGGTCCATTGACATTGCAGCGAGCCTTCCTTATTTGATTTTGGAAGCCATGGGAAATGACGCAGAGTTCATGGATGTTGTGTCCAACTAA 1323 0.48 MENVRVISTTTIKATVPNNANPHKLDLTPWDLQFLPTETIQKGLLFRNVKHTPFQIHHLQHSLSSTLAFFPLLAGRLAILRHHHTIVSSHIVCNNAGALFVHAAAPNTTVAHILQPKYVPLIVSSFFSINGVKNYEGTSQPLLAVQVTELVDGIFIALTVNHVVADGKSLWHFVNSWAEISRGSLQISKLPSLYRYFPDGIDHPIHFPFTEEEENQHSPNPKPLAPHERVFHFTKEKIAELKSKANAEANSDRISSLQALLTLVWRSVTRCKRVEPQENVHYVLFIGVWSRMDPPLAEGYFGNSVIATVVSMKAGKLLEGGLGKGALEMNKVISLHSGEKVKKHYECWVRRPRLLTLPSGVGGSNYLITSSSPRFKILDNDFGWGKAEAVRIGGGQHKRNGMITVFGGAEEGSIDIAASLPYLILEAMGNDAEFMDVVSN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03840 440 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 435 - -
Viun3g03840 440 Pfam Transferase family 4 435 - -
Viun3g03840 440 Gene3D - 208 428 IPR023213 -
Viun3g03840 440 Gene3D - 2 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03840 Viun-Chr3 45719172 45720552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03840 54 420 Monolignol Biosynthesis Gene Families AT5G48930 28.165 8.65e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03840 - - gmx:100797643 592.423