Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03836 ATGGCTAATGACGATGAACCCAAAAGTCATCTCTTCGGCATCAAAAATCTCTCTCATAAGACACTCCTTCAGAGCGATGCACTCTATCAGTACATACTTGAAACCAGTGTTTATCCAAGAGAGCACGAGTGCTTGAAGGAGCTCCGCGAGATGACAGAAAAACACCCTCGGAACATCATGGCTACACCACCAGACGAAGGCCAACTTCTGAGCATGCTTATTAAGCTCATTAATGCCAAGAACACCTTGGAAATTGGTGTATACACTGGTTATTCTCTTCTCTCCAGTGCCCTCGCTCTTCCCTCTGATGGAAAGATCTTGGCTTTGGACGTGAACCGCGAATACTATGAATTGGGTTTGCCCATCATTGAAAAAGCTGGTGTGGCTCACAAGATCGACTTCAGAGAGGGACCTGCTCTTCCTTTTCTTGACGAGCTGCTTAAAGATGAGAATAAGAAGGGAACGTTCGATTTCGTTTTCGTTGATGCTGATAAGAACAATTACTTGAACTATCACAAGAGAGTAATTGATCTGGTGAAAGTGGGAGGTCTGATCGGATACGACAACACCCTATGGGCTGGATCTGTGGCCGCGCCTCCTGATGCACCGTTGATGGATTACGTTAAGCCTCTTCGCATCTATGTGTTGGAGCTGAACAAGTACCTGGCACAAGATTCAAGGATCGAGATTTGCCAGCTCTCCGTGGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA 741 0.4683 MANDDEPKSHLFGIKNLSHKTLLQSDALYQYILETSVYPREHECLKELREMTEKHPRNIMATPPDEGQLLSMLIKLINAKNTLEIGVYTGYSLLSSALALPSDGKILALDVNREYYELGLPIIEKAGVAHKIDFREGPALPFLDELLKDENKKGTFDFVFVDADKNNYLNYHKRVIDLVKVGGLIGYDNTLWAGSVAAPPDAPLMDYVKPLRIYVLELNKYLAQDSRIEICQLSVGDGITLCRRII 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03836 246 PANTHER O-METHYLTRANSFERASE-RELATED 18 245 - -
Viun3g03836 246 Pfam O-methyltransferase 34 245 IPR002935 GO:0008171
Viun3g03836 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
Viun3g03836 246 Gene3D Vaccinia Virus protein VP39 11 246 IPR029063 -
Viun3g03836 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
Viun3g03836 246 FunFam Caffeoyl-CoA O-methyltransferase 1 14 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03836 Viun-Chr3 45693319 45694825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03836 4 245 Monolignol Biosynthesis Gene Families AT4G34050 73.967 2.43e-133 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03836 K00588 - gmx:100305498 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02120 2 29330206 29331690 Viun3g03836 3 45693319 45694825 ECH
Viun3g03836 3 45693319 45694825 Viun3g03836 3 45693319 45694825 ECH
Viun2g02120 2 29330206 29331690 Viun3g03836 3 45693319 45694825 PCT